Evidence map›Paper›PMID 27618674›Full record

ArticleNeuron2016

Strategies and Tools for Combinatorial Targeting of GABAergic Neurons in Mouse Cerebral Cortex.

Miao He, Jason Tucciarone, SooHyun Lee, Maximiliano José Nigro, Yongsoo Kim, Jesse Maurica Levine, Sean Michael Kelly, Illya Krugikov, Priscilla Wu, Yang Chen and 5 more

Erratum issuedAbstract read
In one paragraph

Article in Neuron, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 181 papers.

0numbers the graph read from it
0cells of the map it votes in
181citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

181 citing papers in PubMed.

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121 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Miao HeCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Institutes of Brain Science, State Key Laboratory of Medical Neurobiology, Collaborative Innovation Center for Brain Science, Fudan University, Shanghai 200032, China.
Jason TucciaroneCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Program in Neuroscience and Medical Scientist Training Program, Stony Brook University, Stony Brook, NY 11790, USA.
SooHyun LeeNew York University Neuroscience Institute, NYU School of Medicine, New York, NY 10016, USA.
Maximiliano José NigroNew York University Neuroscience Institute, NYU School of Medicine, New York, NY 10016, USA.
Yongsoo KimCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Jesse Maurica LevineCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Program in Neuroscience and Medical Scientist Training Program, Stony Brook University, Stony Brook, NY 11790, USA.
Sean Michael KellyCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Program in Neuroscience and Medical Scientist Training Program, Stony Brook University, Stony Brook, NY 11790, USA.
Illya KrugikovNew York University Neuroscience Institute, NYU School of Medicine, New York, NY 10016, USA.
Priscilla WuCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Yang ChenInstitutes of Brain Science, State Key Laboratory of Medical Neurobiology, Collaborative Innovation Center for Brain Science, Fudan University, Shanghai 200032, China.
Ling GongInstitutes of Brain Science, State Key Laboratory of Medical Neurobiology, Collaborative Innovation Center for Brain Science, Fudan University, Shanghai 200032, China.
Yongjie HouInstitutes of Brain Science, State Key Laboratory of Medical Neurobiology, Collaborative Innovation Center for Brain Science, Fudan University, Shanghai 200032, China.
Pavel OstenCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Bernardo RudyNew York University Neuroscience Institute, NYU School of Medicine, New York, NY 10016, USA.
Z Josh HuangCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA. Electronic address: huangj@cshl.edu.

Funding

The role of genetic and activity dependent cues in the generation of 5HT3aR interneuron diversityP01NS074972 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MACHOLD, ROBERT P · 2012 to 2023
$15.5M
Circuit mechanisms underlying cortical communicationsZIAMH002959 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI LEE, SOOHYUN · 2017 to 2025
$13.7M
EXPRESSION AND FUNCTION OF K+ CHANNEL GENES IN THE CNSR01NS030989 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI RUDY, BERNARDO · 1992 to 2015
$6.3M
Towards quantitative cell type-based mapping of the whole mouse brainU01MH105971 · NIMH · COLD SPRING HARBOR LABORATORY · PI OSTEN, PAVEL · 2014 to 2016
$3.9M
Cell-based genomic analysis of molecular pathology in Mouse Models of Rett SyndromeR01MH102616 · NIMH · COLD SPRING HARBOR LABORATORY · PI HUANG, Z JOSH · 2014 to 2018
$3.8M
Development of Recombinase-Expressing Mouse Lines for Studying the DevelopmentU01MH078844 · NIMH · COLD SPRING HARBOR LABORATORY · PI HUANG, Z JOSH · 2006 to 2010
$2.8M
NIMH NIH HHS R01 MH102616NIMH NIH HHS U01 MH078844NIMH NIH HHS U01 MH105971NINDS NIH HHS P01 NS074972NINDS NIH HHS R01 NS030989
6 · The paper itself

Abstract

Systematic genetic access to GABAergic cell types will facilitate studying the function and development of inhibitory circuitry. However, single gene-driven recombinase lines mark relatively broad and heterogeneous cell populations. Although intersectional approaches improve precision, it remains unclear whether they can capture cell types defined by multiple features. Here we demonstrate that combinatorial genetic and viral approaches target restricted GABAergic subpopulations and cell types characterized by distinct laminar location, morphology, axonal projection, and electrophysiological properties. Intersectional embryonic transcription factor drivers allow finer fate mapping of progenitor pools that give rise to distinct GABAergic populations, including laminar cohorts. Conversion of progenitor fate restriction signals to constitutive recombinase expression enables viral targeting of cell types based on their lineage and birth time. Properly designed intersection, subtraction, conversion, and multi-color reporters enhance the precision and versatility of drivers and viral vectors. These strategies and tools will facilitate studying GABAergic neurons throughout the mouse brain.

Indexed as

Genetic VectorsAnimalsCerebral CortexGABAergic NeuronsMiceMutationNeural Stem CellsRecombinasesVirusesRecombinases

Identifiers

PMID27618674
PMCPMC5223593

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.