Evidence map›Paper›PMID 27618485›Full record

ArticleMolecular cell2016

A G-Rich Motif in the lncRNA Braveheart Interacts with a Zinc-Finger Transcription Factor to Specify the Cardiovascular Lineage.

Zhihong Xue, Scott Hennelly, Boryana Doyle, Arune A Gulati, Irina V Novikova, Karissa Y Sanbonmatsu, Laurie A Boyer

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 159 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Structural basis for the function of long noncoding RNAbioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. The Multiscale Ernwin/SPQR RNA Structure Prediction Pipeline.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  15. Article
  16. Article
  17. The Role of Long Non-Coding RNAs in Cardiovascular Diseases.International journal of molecular sciences · 2023
    Review
  18. Article
  19. Article
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Zhihong XueDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Scott HennellyLos Alamos National Laboratory, Theoretical Biology and Biophysics Group, Los Alamos, NM 87545, USA; New Mexico Consortium, Los Alamos, NM 87544, USA.
Boryana DoyleUndergraduate Research Opportunities Program, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Arune A GulatiDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Irina V NovikovaLos Alamos National Laboratory, Theoretical Biology and Biophysics Group, Los Alamos, NM 87545, USA; Pacific Northwest National Laboratory, Environmental Molecular Sciences Laboratory, Richmond, WA 99354, USA.
Karissa Y SanbonmatsuLos Alamos National Laboratory, Theoretical Biology and Biophysics Group, Los Alamos, NM 87545, USA; New Mexico Consortium, Los Alamos, NM 87544, USA.
Laurie A BoyerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. Electronic address: lboyer@mit.edu.
Massachusetts Institute of Technology · USLos Alamos National Laboratory · USNew Mexico Consortium · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MATTHEW G. VANDER HEIDEN · 1985 to 2026
$93.9M
The Epigenetic Landscape of Heart DevelopmentU01HL098179 · NHLBI · J. DAVID GLADSTONE INSTITUTES · PI BOYER, LAURIE A, BRUNEAU, BENOIT GAETAN · 2009 to 2014
$10.0M
Structure-based Simulation of Riboswitches: Electrostatic EffectsR01GM110310 · NIGMS · TRIAD NATIONAL SECURITY, LLC · PI SANBONMATSU, KARISSA Y · 2015 to 2023
$2.6M
NCI NIH HHS P30 CA014051NHLBI NIH HHS U01 HL098179NIGMS NIH HHS R01 GM110310
6 · The paper itself

Abstract

Long non-coding RNAs (lncRNAs) are an emerging class of transcripts that can modulate gene expression; however, their mechanisms of action remain poorly understood. Here, we experimentally determine the secondary structure of Braveheart (Bvht) using chemical probing methods and show that this ∼590 nt transcript has a modular fold. Using CRISPR/Cas9-mediated editing of mouse embryonic stem cells, we find that deletion of 11 nt in a 5' asymmetric G-rich internal loop (AGIL) of Bvht (bvht

Indexed as

AnimalsBacterial ProteinsBase CompositionBase SequenceBinding SitesCell DifferentiationCell LineageClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Associated Protein 9EndonucleasesGene DeletionGene EditingGene Expression RegulationHumansMiceMouse Embryonic Stem CellsBacterial ProteinsCas9 endonuclease Streptococcus pyogenesCnbp protein, mouseCRISPR-Associated Protein 9EndonucleasesRNA-Binding ProteinsRNA, Long NoncodingBraveheartcardiacCNBPlong non-coding RNASHAPE

Identifiers

PMID27618485
PMCPMC6728430
OpenAlexW2520277796

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.