Evidence map›Paper›PMID 27618443›Full record

ArticlePLoS genetics2016

Oligomerization of SCFTIR1 Is Essential for Aux/IAA Degradation and Auxin Signaling in Arabidopsis.

Mohammad H Dezfulian, Espanta Jalili, Don Karl A Roberto, Britney L Moss, Kerry Khoo, Jennifer L Nemhauser, William L Crosby

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
13.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The Systems and Synthetic Biology of Auxin.Cold Spring Harbor perspectives in biology · 2022
    Review
  8. Review
  9. TheInternational journal of molecular sciences · 2021
    Article
  10. No Time for Transcription-Rapid Auxin Responses in Plants.Cold Spring Harbor perspectives in biology · 2021
    Review
  11. Article
  12. Article
  13. Regulation of auxin transcriptional responses.Developmental dynamics : an official publication of the American Association of Anatomists · 2020
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Mohammad H DezfulianDepartment of Biological Sciences, University of Windsor, Windsor, Ontario, Canada.
Espanta JaliliDepartment of Biological Sciences, University of Windsor, Windsor, Ontario, Canada.
Don Karl A RobertoDepartment of Biological Sciences, University of Windsor, Windsor, Ontario, Canada.ORCID 0000-0001-5938-545X
Britney L MossDepartment of Biology, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-1037-5717
Kerry KhooDepartment of Biological Sciences, University of Windsor, Windsor, Ontario, Canada.
Jennifer L NemhauserDepartment of Biology, University of Washington, Seattle, Washington, United States of America.
William L CrosbyDepartment of Biological Sciences, University of Windsor, Windsor, Ontario, Canada.
University of Windsor · CAUniversity of Washington · US

Funding

Control of protein degradation dynamics in the auxin responseR01GM107084 · NIGMS · UNIVERSITY OF WASHINGTON · PI NEMHAUSER, JENNIFER L · 2014 to 2022
$2.4M
Determinants of Protein Degradation Dynamics in Cell SignalingF32CA180514 · NCI · UNIVERSITY OF WASHINGTON · PI MOSS, BRITNEY LANE · 2013 to 2015
$111k
NCI NIH HHS F32 CA180514NIGMS NIH HHS R01 GM107084
6 · The paper itself

Abstract

The phytohormone auxin is a key regulator of plant growth and development. Molecular studies in Arabidopsis have shown that auxin perception and signaling is mediated via TIR1/AFB-Aux/IAA co-receptors that assemble as part of the SCFTIR1/AFB E3 ubiquitin-ligase complex and direct the auxin-regulated degradation of Aux/IAA transcriptional repressors. Despite the importance of auxin signaling, little is known about the functional regulation of the TIR1/AFB receptor family. Here we show that TIR1 can oligomerize in planta via a set of spatially clustered amino acid residues. While none of the residues identified reside in the interaction interface of the TIR1-Aux/IAA degron, they nonetheless regulate the binding of TIR1 to Aux/IAA substrate proteins and their subsequent degradation in vivo as an essential aspect of auxin signaling. We propose oligomerization of TIR1 as a novel regulatory mechanism in the regulation of auxin-mediated plant patterning and development.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsDNA-Binding ProteinsF-Box ProteinsGene Expression Regulation, PlantIndoleacetic AcidsMultienzyme ComplexesPlants, Genetically ModifiedReceptors, Cell SurfaceSignal TransductionArabidopsis ProteinsDNA-Binding ProteinsF-Box Proteinsindole-3-acetic acid synthaseIndoleacetic AcidsMultienzyme ComplexesReceptors, Cell SurfaceTIR1 protein, Arabidopsis

Identifiers

PMID27618443
PMCPMC5019376
OpenAlexW2518841398

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.