Evidence map›Paper›PMID 27616475›Full record

ArticleAmerican journal of medical genetics. Part A2016

Gene variants as risk factors for gastroschisis.

Amy M Padula, Wei Yang, Kathleen Schultz, Lauren Tom, Bin Lin, Suzan L Carmichael, Edward J Lammer, Gary M Shaw

Open access · bronzeAbstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Gene variants as risk factors for gastroschisis.American journal of medical genetics. Part A · 2016
    Article
  9. Examining the Relationship Between Gastroschisis and Placental Fetal Vascular Malperfusion.Pediatric and developmental pathology : the official journal of the Society for Pediatric Pathology and the Paediatric Pathology Society
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Amy M PadulaDepartment of Obstetrics, Gynecology and Reproductive Sciences, University of California, San Francisco, California. amy.padula@ucsf.edu.
Wei YangDepartment of Pediatrics, Stanford University School of Medicine, California.
Kathleen SchultzUCSF Benioff Children's Hospital Oakland, Oakland, California.
Lauren TomUCSF Benioff Children's Hospital Oakland, Oakland, California.
Bin LinUCSF Benioff Children's Hospital Oakland, Oakland, California.
Suzan L CarmichaelDepartment of Pediatrics, Stanford University School of Medicine, California.
Edward J LammerUCSF Benioff Children's Hospital Oakland, Oakland, California.
Gary M ShawDepartment of Pediatrics, Stanford University School of Medicine, California.
UCSF Benioff Children's Hospital · USStanford University · USUniversity of California, San Francisco · US

Funding

Traffic-related Air Pollution, Social Factors and Adverse Birth OutcomesR00ES021470 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PADULA, AMY MICHELLE · 2016 to 2018
$746k
Traffic-related air pollution, social factors and adverse birth outcomesK99ES021470 · NIEHS · STANFORD UNIVERSITY · PI PADULA, AMY MICHELLE · 2013 to 2014
$254k
NIEHS NIH HHS K99 ES021470NIEHS NIH HHS L40 ES023163NIEHS NIH HHS R00 ES021470
6 · The paper itself

Abstract

In a population-based case-control study in California of 228 infants, we investigated 75 genetic variants in 20 genes and risk of gastroschisis with regard to maternal age, race/ethnicity, vitamin use, and smoking exposure. We hypothesized that genes related to vascular compromise may interact with environmental factors to affect the risk of gastroschisis. Haplotypes were constructed for 75 gene variants using the HaploView program. Risk for gastroschisis associated with each gene variant was calculated for both the homozygotes and the heterozygotes, with the homozygous wildtypes as the referent. Risks were estimated as odds ratios (ORs) with 95% confidence intervals (CIs) by logistic regression. We found 11 gene variants with increased risk and four variants with decreased risk of gastroschisis for heterozygous (OR

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseGenetic VariationAllelesCaliforniaCase-Control StudiesGastroschisisGenotypeHaplotypesHumansOdds RatioRisk Factorsgastroschisisgene variant

Identifiers

PMID27616475
PMCPMC5096035
OpenAlexW2519959986

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.