Evidence map›Paper›PMID 27616185›Full record

ArticleScientific reports2016

Molecular evolutionary dynamics of cytochrome P450 monooxygenases across kingdoms: Special focus on mycobacterial P450s.

Mohammad Parvez, Lehlohonolo Benedict Qhanya, Ntsane Trevor Mthakathi, Ipeleng Kopano Rosinah Kgosiemang, Hans Denis Bamal, Nataraj Sekhar Pagadala, Ting Xie, Haoran Yang, Hengye Chen, Chrispian William Theron and 17 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
10.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 82 citations in OpenAlex.

  1. Insects · 2026
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  2. Binding Site Vectors Enable Mapping of Cytochrome P450 Functional Landscapes.Journal of chemical information and modeling · 2026
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  3. Structure-Function Analysis ofInternational journal of molecular sciences · 2025
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  7. Tryptophan extends the life of cytochrome P450.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Article
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  11. Lifestyles Shape the Cytochrome P450 Repertoire of the Bacterial PhylumInternational journal of molecular sciences · 2022
    Article
  12. Contrasting Health Effects ofInternational journal of molecular sciences · 2022
    Article
  13. Article
  14. In Silico Structural Modeling and Analysis of Interactions ofInternational journal of molecular sciences · 2021
    Article
  15. Ancient Bacterial ClassInternational journal of molecular sciences · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. More P450s Are Involved in Secondary Metabolite Biosynthesis inInternational journal of molecular sciences · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 7 institutions in 4 countries.

Mohammad ParvezUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Lehlohonolo Benedict QhanyaUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Ntsane Trevor MthakathiUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Ipeleng Kopano Rosinah KgosiemangUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Hans Denis BamalUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Nataraj Sekhar PagadalaDepartment of Medical Microbiology and Immunology, 6-020 Katz Group Centre, University of Alberta, Edmonton, Alberta T6G 2E1, Canada.
Ting XieCollege of Informatics, Huazhong Agricultural University, Wuhan, Hubei Province, China.
Haoran YangCollege of Food Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China.
Hengye ChenCollege of Food Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China.
Chrispian William TheronFaculty of Natural and Agricultural Science, Department of Microbial, Biochemical and Food Biotechnology, University of the Free State, P.O. Box 339, Bloemfontein, 9300, South Africa.
Richie MonyakiUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Seiso Caiphus RaselemaneUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Vuyani SaleweUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Bogadi Lorato MongaleUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Retshedisitswe Godfrey MatowaneUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Sara Mohamed Hasaan AbdallaUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Wool Isaac BooiUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Mari van WykUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Dedré OlivierUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Charlotte E BoucherFaculty of Natural and Agricultural Science, Department of Microbial, Biochemical and Food Biotechnology, University of the Free State, P.O. Box 339, Bloemfontein, 9300, South Africa.
David R NelsonDepartment of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, Memphis, TN 38163, USA.
Jack A TuszynskiDepartment of Physics, University of Alberta, Edmonton, Alberta T6G 2J1, Canada.
Jonathan Michael BlackburnInstitute of Infectious Disease &Molecular Medicine; Department of Integrative Biomedical Sciences, Faculty of Health Sciences, University of Cape Town, Cape Town 7925, South Africa.
Jae-Hyuk YuDepartment of Bacteriology, University of Wisconsin-Madison, 3155 MSB, 1550 Linden Drive, Madison WI 53706, USA.
Samson Sitheni MasheleUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Wanping ChenCollege of Food Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China.
Khajamohiddin SyedUnit for Drug Discovery Research, Department of Health Sciences, Faculty of Health and Environmental Sciences, Central University of Technology, Bloemfontein 9300, Free State, South Africa.
Central University of Technology · ZAHuazhong Agricultural University · CNUniversity of Alberta · CAUniversity of the Free State · ZAUniversity of Cape Town · ZAUniversity of Tennessee Health Science Center · USUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since the initial identification of cytochrome P450 monooxygenases (CYPs/P450s), great progress has been made in understanding their structure-function relationship, diversity and application in producing compounds beneficial to humans. However, the molecular evolution of P450s in terms of their dynamics both at protein and DNA levels and functional conservation across kingdoms still needs investigation. In this study, we analyzed 17 598 P450s belonging to 113 P450 families (bacteria -42; fungi -19; plant -28; animal -22; plant and animal -1 and common P450 family -1) and found highly conserved and rapidly evolving P450 families. Results suggested that bacterial P450s, particularly P450s belonging to mycobacteria, are highly conserved both at protein and DNA levels. Mycobacteria possess the highest P450 diversity percentage compared to other microbes and have a high coverage of P450s (≥1%) in their genomes, as found in fungi and plants. Phylogenetic and functional analyses revealed the functional conservation of P450s despite belonging to different biological kingdoms, suggesting the adherence of P450s to their innate function such as their involvement in either generation or oxidation of steroids and structurally related molecules, fatty acids and terpenoids. This study's results offer new understanding of the dynamic structural nature of P450s.

Indexed as

Evolution, MolecularMolecular Dynamics SimulationAnimalsCytochrome P-450 Enzyme SystemGenome, BacterialGenome, FungalGenome, PlantMycobacteriumPhylogenyCytochrome P-450 Enzyme System

Identifiers

PMID27616185
PMCPMC5018878
OpenAlexW2519223696

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.