Evidence map›Paper›PMID 27613865›Full record

ArticleThe Journal of biological chemistry2016

Lipids Activate SecA for High Affinity Binding to the SecYEG Complex.

Sabrina Koch, Janny G de Wit, Iuliia Vos, Jan Peter Birkner, Pavlo Gordiichuk, Andreas Herrmann, Antoine M van Oijen, Arnold J M Driessen

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. The Nanodisc System for Investigating Protein-Lipid Interactions.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  3. Article
  4. Article
  5. SecYEG-mediated translocation in a model synthetic cell.Synthetic biology (Oxford, England) · 2024
    Article
  6. Review
  7. Structural basis of SecA-mediated protein translocation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Review
  9. Article
  10. Article
  11. The Dynamic SecYEG Translocon.Frontiers in molecular biosciences · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Binding of SecA ATPase monomers and dimers to lipid vesicles.Biochimica et biophysica acta. Biomembranes · 2020
    Article
  16. Article
  17. Protein Translocation Activity in Surface-Supported Lipid Bilayers.Langmuir : the ACS journal of surfaces and colloids · 2019
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Sabrina KochFrom the Molecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute and Zernike Institute for Advanced Materials and.
Janny G de WitFrom the Molecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute and Zernike Institute for Advanced Materials and.
Iuliia VosFrom the Molecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute and Zernike Institute for Advanced Materials and.
Jan Peter Birknerthe Single-molecule Biophysics, Zernike Institute for Advanced Materials, University of Groningen, 9747 AG Groningen, The Netherlands.
Pavlo Gordiichukthe Polymer Chemistry and Bioengineering, Zernike Institute for Advanced Materials, 9747 AG, Groningen, The Netherlands, and.
Andreas Herrmannthe Polymer Chemistry and Bioengineering, Zernike Institute for Advanced Materials, 9747 AG, Groningen, The Netherlands, and.
Antoine M van Oijenthe Single-molecule Biophysics, Zernike Institute for Advanced Materials, University of Groningen, 9747 AG Groningen, The Netherlands.
Arnold J M DriessenFrom the Molecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute and Zernike Institute for Advanced Materials and a.j.m.driessen@rug.nl.ORCID http://orcid.org/0000-0001-9258-9104
Biotechnology Institute · USUniversity of Groningen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein translocation across the bacterial cytoplasmic membrane is an essential process catalyzed predominantly by the Sec translocase. This system consists of the membrane-embedded protein-conducting channel SecYEG, the motor ATPase SecA, and the heterotrimeric SecDFyajC membrane protein complex. Previous studies suggest that anionic lipids are essential for SecA activity and that the N terminus of SecA is capable of penetrating the lipid bilayer. The role of lipid binding, however, has remained elusive. By employing differently sized nanodiscs reconstituted with single SecYEG complexes and comprising varying amounts of lipids, we establish that SecA gains access to the SecYEG complex via a lipid-bound intermediate state, whereas acidic phospholipids allosterically activate SecA for ATP-dependent protein translocation.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsEscherichia coliEscherichia coli ProteinsLipid BilayersPhospholipidsProtein TransportSecA ProteinsSEC Translocation ChannelsAdenosine TriphosphatasesBacterial ProteinsEscherichia coli ProteinsLipid BilayersPhospholipidsSecA ProteinsSecE protein, E coliSecG protein, E coliSEC Translocation ChannelsSecY protein, E coliapolipoproteinlipid bilayermembrane biophysicsmembrane functionmembrane proteinnanodiscsprotein-lipid interactionscaffold proteinSecASecYEG

Identifiers

PMID27613865
PMCPMC5077191
OpenAlexW2509810353

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.