Evidence map›Paper›PMID 27613445›Full record

ArticleAging cell2016

A comprehensive approach to the molecular determinants of lifespan using a Boolean model of geroconversion.

Loic Verlingue, Aurélien Dugourd, Gautier Stoll, Emmanuel Barillot, Laurence Calzone, Arturo Londoño-Vallejo

Open access · goldAbstract read
In one paragraph

Article in Aging cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Boolean network modeling in systems pharmacology.Journal of pharmacokinetics and pharmacodynamics · 2018
    Review
  9. Article
  10. Article
  11. Identification ofAging · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Loic VerlingueInstitut Curie, CNRS, UMR3244, Telomere and Cancer Laboratory, PSL Research University, 75005, Paris, France.
Aurélien DugourdInstitut Curie, Mines Paris Tech, Inserm, U900, PSL Research University, F-75005, Paris, France.
Gautier StollSorbonne Paris Cité, Université Paris Descartes, 12 Rue de l'École de Médecine, 75006, Paris, France.
Emmanuel BarillotInstitut Curie, Mines Paris Tech, Inserm, U900, PSL Research University, F-75005, Paris, France.
Laurence CalzoneInstitut Curie, Mines Paris Tech, Inserm, U900, PSL Research University, F-75005, Paris, France.
Arturo Londoño-VallejoInstitut Curie, CNRS, UMR3244, Telomere and Cancer Laboratory, PSL Research University, 75005, Paris, France.
Inserm · FRCentre National de la Recherche Scientifique · FRDélégation Paris 5 · FR

Funding

ANRINCa
6 · The paper itself

Abstract

Altered molecular responses to insulin and growth factors (GF) are responsible for late-life shortening diseases such as type-2 diabetes mellitus (T2DM) and cancers. We have built a network of the signaling pathways that control S-phase entry and a specific type of senescence called geroconversion. We have translated this network into a Boolean model to study possible cell phenotype outcomes under diverse molecular signaling conditions. In the context of insulin resistance, the model was able to reproduce the variations of the senescence level observed in tissues related to T2DM's main morbidity and mortality. Furthermore, by calibrating the pharmacodynamics of mTOR inhibitors, we have been able to reproduce the dose-dependent effect of rapamycin on liver degeneration and lifespan expansion in wild-type and HER2-neu mice. Using the model, we have finally performed an in silico prospective screen of the risk-benefit ratio of rapamycin dosage for healthy lifespan expansion strategies. We present here a comprehensive prognostic and predictive systems biology tool for human aging.

Indexed as

Boolean modelingcancerin silico drug screeninglifespan expansionrapamycintype 2 diabetes mellitus

Identifiers

PMID27613445
PMCPMC6398530
OpenAlexW2510766325

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.