Evidence map›Paper›PMID 27612419›Full record

ArticleOncotarget2016

nc886, a non-coding RNA and suppressor of PKR, exerts an oncogenic function in thyroid cancer.

Eun Kyung Lee, Seung-Hyun Hong, Sooyong Shin, Hyun-Sung Lee, Ju-Seog Lee, Eun Jung Park, Sun Shim Choi, Jae Woong Min, Daeyoon Park, Jung-Ah Hwang and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Non-coding 886 (Epigenetics · 2024
    Review
  4. Review
  5. Article
  6. Review
  7. Hypermethylation ofMolecular therapy. Nucleic acids · 2022
    Article
  8. Article
  9. Downregulation ofGenes & diseases · 2022
    Article
  10. Are We Studying Non-Coding RNAs Correctly? Lessons from nc886.International journal of molecular sciences · 2022
    Review
  11. Article
  12. Review
  13. Article
  14. International journal of molecular sciences · 2021
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Mechanism mediated by a noncoding RNA, nc886, in the cytotoxicity of a DNA-reactive compound.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Eun Kyung LeeCenter for Thyroid Cancer, National Cancer Center, Goyang, 410-769, Korea.
Seung-Hyun HongCancer Genomics Branch, Research Institute, National Cancer Center, Goyang, 410-769, Korea.
Sooyong ShinDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA.
Hyun-Sung LeeDivision of Thoracic Surgery, Michael E. DeBakey Department of Surgery, Baylor College of Medicine, Houston, TX 77030, USA.
Ju-Seog LeeDepartment of Systems Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Eun Jung ParkCancer Immunology Branch, National Cancer Center, Goyang, 410-769, Korea.
Sun Shim ChoiDivision of Biomedical Convergence, College of Biomedical Science, and Institute of Bioscience & Biotechnology, Kangwon National University, Chuncheon, 200-701, Korea.
Jae Woong MinDivision of Biomedical Convergence, College of Biomedical Science, and Institute of Bioscience & Biotechnology, Kangwon National University, Chuncheon, 200-701, Korea.
Daeyoon ParkCenter for Thyroid Cancer, National Cancer Center, Goyang, 410-769, Korea.
Jung-Ah HwangCancer Genomics Branch, Research Institute, National Cancer Center, Goyang, 410-769, Korea.
Betty H JohnsonDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA.
Sung Ho JeonDepartment of Life Science and Center for Aging and Health Care, Hallym University, Chuncheon, 200-702, Korea.
In-Hoo KimDepartment of Cancer System Science, Graduate School of Cancer Science and Policy, National Cancer Center, Goyang, 410-769, Korea.
Yeon-Su LeeCancer Genomics Branch, Research Institute, National Cancer Center, Goyang, 410-769, Korea.
Yong Sun LeeDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA.
National Cancer Center · KRThe University of Texas Medical Branch at Galveston · USKangwon National University · KRBaylor College of Medicine · USHallym University · KRThe University of Texas MD Anderson Cancer Center · US

Funding

HSRD VA CDP 12-187
6 · The paper itself

Abstract

nc886 is a recently identified cellular non-coding RNA and its depletion leads to acute cell death via PKR (Protein Kinase RNA-activated) activation. nc886 expression is increased in some malignancies, but silenced in others. However, the precise role of nc886/PKR is controversial: is it a tumor suppressor or an oncogene? In this study, we have clarified the role of nc886 in thyroid cancer by sequentially generating PKR knockout (KO) and PKR/nc886 double KO cell lines from Nthy-ori 3-1, a partially transformed thyroid cell line. Compared to the wildtype, PKR KO alone does not exhibit any significant phenotypic changes. However, nc886 KO cells are less proliferative, migratory, and invasive than their parental PKR KO cells. Importantly, the requirement of nc886 in tumor phenotypes is totally independent of PKR. In our microarray data, nc886 KO suppresses some genes whose elevated expression is associated with poor survival confirmed by data from total of 505 thyroid cancer patients in the Caner Genome Atlas project. Also, the nc886 expression level tends to be elevated and in more aggressively metastatic tumor specimens from thyroid cancer patients. In summary, we have discovered nc886's tumor-promoting role in thyroid cancer which has been concealed by the PKR-mediated acute cell death.

Indexed as

OncogenesAdultCell DeathCell Line, TumorCell MovementCell ProliferationComputational BiologyeIF-2 KinaseGene Expression ProfilingGene Expression Regulation, NeoplasticGene Knockout TechniquesGene OntologyGene SilencingHumansMiddle AgedNeoplasm MetastasisEIF2AK2 protein, humaneIF-2 KinaseRNA, Untranslatednc886oncogeneprotein kinase Rthyroid cancer

Identifiers

PMID27612419
PMCPMC5342718
OpenAlexW2519155867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.