Evidence map›Paper›PMID 27611315›Full record

ArticlePloS one2016

Genetically Determined Response to Artemisinin Treatment in Western Kenyan Plasmodium falciparum Parasites.

Lorna J Chebon, Bidii S Ngalah, Luicer A Ingasia, Dennis W Juma, Peninah Muiruri, Jelagat Cheruiyot, Benjamin Opot, Emmanuel Mbuba, Mabel Imbuga, Hoseah M Akala and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Impacts of Antimalarial Drugs onThe American journal of tropical medicine and hygiene · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Lorna J ChebonDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Bidii S NgalahDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Luicer A IngasiaDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Dennis W JumaDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Peninah MuiruriDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Jelagat CheruiyotDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Benjamin OpotDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Emmanuel MbubaIfakara Health Institute, Bagamoyo, Tanzania.
Mabel ImbugaInstitute of Tropical Medicine and Infectious Diseases, College of Health Sciences, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya.
Hoseah M AkalaDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Wallace BulimoDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Ben AndagaluDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Edwin KamauDepartment of Emerging and Infectious Diseases, United States Army Medical Research Directorate-Kenya, Kenya Medical Research Institute (KEMRI)/Walter Reed Project, Kisumu, Kenya.
Kenya Medical Research Institute · KEUnited States Army Medical Research Directorate - Africa · KEIfakara Health Institute · TZJomo Kenyatta University of Agriculture and Technology · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetically determined artemisinin resistance in Plasmodium falciparum has been described in Southeast Asia. The relevance of recently described Kelch 13-propeller mutations for artemisinin resistance in Sub-Saharan Africa parasites is still unknown. Southeast Asia parasites have low genetic diversity compared to Sub-Saharan Africa, where parasites are highly genetically diverse. This study attempted to elucidate whether genetics provides a basis for discovering molecular markers in response to artemisinin drug treatment in P. falciparum in Kenya. The genetic diversity of parasites collected pre- and post- introduction of artemisinin combination therapy (ACT) in western Kenya was determined. A panel of 12 microsatellites and 91 single nucleotide polymorphisms (SNPs) distributed across the P. falciparum genome were genotyped. Parasite clearance rates were obtained for the post-ACT parasites. The 12 microsatellites were highly polymorphic with post-ACT parasites being significantly more diverse compared to pre-ACT (p < 0.0001). The median clearance half-life was 2.55 hours for the post-ACT parasites. Based on SNP analysis, 15 of 90 post-ACT parasites were single-clone infections. Analysis revealed 3 SNPs that might have some causal association with parasite clearance rates. Further, genetic analysis using Bayesian tree revealed parasites with similar clearance phenotypes were more closely genetically related. With further studies, SNPs described here and genetically determined response to artemisinin treatment might be useful in tracking artemisinin resistance in Kenya.

Indexed as

AntimalarialsArtemisininsBayes TheoremGenetic VariationGenotypeHumansKenyaMicrosatellite RepeatsPhylogenyPlasmodium falciparumPolymorphism, Single NucleotideProtozoan ProteinsAntimalarialsArtemisininsProtozoan Proteins

Identifiers

PMID27611315
PMCPMC5017781
OpenAlexW2517851271

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.