Evidence map›Paper›PMID 27611230›Full record

ArticlePlant signaling & behavior2016

Chromatin architecture: A new dimension in the dynamic control of gene expression.

Juan Sebastian Ramirez-Prado, Natalia Yaneth Rodriguez-Granados, Federico Ariel, Cécile Raynaud, Moussa Benhamed

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Juan Sebastian Ramirez-Pradoa Division of Biological and Environmental Sciences and Engineering , King Abdullah University of Science and Technology , Thuwal 23955-6900 , Kingdom of Saudi Arabia.
Natalia Yaneth Rodriguez-Granadosb Institute of Plant Sciences Paris-Saclay (IPS2), CNRS, INRA, University Paris-Sud, University of Evry, University Paris-Diderot, Sorbonne Paris-Cite, University of Paris-Saclay , Batiment, Orsay , France.
Federico Arielc Instituto de Agrobiotecnología del Litoral, CONICET, Universidad Nacional del Litoral , 3000 Santa Fe , Argentina.
Cécile Raynaudb Institute of Plant Sciences Paris-Saclay (IPS2), CNRS, INRA, University Paris-Sud, University of Evry, University Paris-Diderot, Sorbonne Paris-Cite, University of Paris-Saclay , Batiment, Orsay , France.
Moussa Benhameda Division of Biological and Environmental Sciences and Engineering , King Abdullah University of Science and Technology , Thuwal 23955-6900 , Kingdom of Saudi Arabia.
Université Paris-Saclay · FRCentre National de la Recherche Scientifique · FRInstituto de Agrobiotecnología del Litoral · ARKing Abdullah University of Science and Technology · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As the most recent evidence of eukaryotic cell complexity, genome architecture has astounded the scientific community and prompted a variety of technical and cognitive challenges. Several technologies have emerged and evidenced the integration of chromatin packaging and topology, epigenetic processes, and transcription for the pertinent regulation of gene expression. In the present addendum we present and discuss some of our recent research, directed toward the holistic comprehension of the processes by which plants respond to environmental and developmental stimuli. We propose that the study of genome topology and genomic interactions is essential for the understanding of the molecular mechanisms behind a phenotype. Even though our knowledge and understanding of genome architecture and hierarchy has improved substantially in the last few years -in Arabidopsis and other eukaryotes -, there is still a long way ahead in this relatively new field of study. For this, it is necessary to take advantage of the high resolution of the emerging available techniques, and perform integrative approaches with which it will be possible to depict the role of chromatin architecture in the regulation of transcription and ultimately, physiological processes.

Indexed as

ArabidopsisChromatinGene ExpressionRNA, Long NoncodingChromatinRNA, Long NoncodingChromatin architecturegene expressiongene loopsgenome topologygenomic interactionslncRNAs

Identifiers

PMID27611230
PMCPMC5117090
OpenAlexW2510654118

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.