Evidence map›Paper›PMID 27609915›Full record

ArticleGenome announcements2016

Draft Genome Sequence of Helicobacter suis Strain SNTW101, Isolated from a Japanese Patient with Nodular Gastritis.

Hidenori Matsui, Tetsufumi Takahashi, Somay Y Murayama, Ikuo Uchiyama, Katsushi Yamaguchi, Shuji Shigenobu, Masato Suzuki, Emiko Rimbara, Keigo Shibayama, Anders Øverby and 1 more

Open access · diamondAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Hidenori MatsuiDepartment of Infection Control and Immunology, Kitasato Institute for Life Sciences and Graduate School of Infection Control Sciences, Kitasato University, Minato-ku, Tokyo, Japan hmatsui@lisci.kitasato-u.ac.jp.
Tetsufumi TakahashiSchool of Pharmaceutical Sciences, Kitasato University, Minato-ku, Tokyo, Japan.
Somay Y MurayamaSchool of Pharmacy, Nihon University, Funabashi-shi, Chiba, Japan.
Ikuo UchiyamaData Integration and Analysis Facility, National Institute for Basic Biology (NIBB), Myodaiji, Okazaki-shi, Aichi, Japan.
Katsushi YamaguchiFunctional Genomic Facility, NIBB, Myodaiji, Okazaki-shi, Aichi, Japan.
Shuji ShigenobuFunctional Genomic Facility, NIBB, Myodaiji, Okazaki-shi, Aichi, Japan.
Masato SuzukiDepartment of Bacteriology II, National Institute of Infectious Diseases, Musashimurayama-shi, Tokyo, Japan.
Emiko RimbaraDepartment of Bacteriology II, National Institute of Infectious Diseases, Musashimurayama-shi, Tokyo, Japan.
Keigo ShibayamaDepartment of Bacteriology II, National Institute of Infectious Diseases, Musashimurayama-shi, Tokyo, Japan.
Anders ØverbySchool of Pharmaceutical Sciences, Kitasato University, Minato-ku, Tokyo, Japan.
Masahiko NakamuraSchool of Pharmaceutical Sciences, Kitasato University, Minato-ku, Tokyo, Japan.
Kitasato University · JPNational Institute for Basic Biology · JPNational Institute of Infectious Diseases · JPNihon University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present here the draft whole-genome shotgun sequence of an uncultivated strain SNTW101 of Helicobacter suis, which has been maintained in the stomachs of mice. This strain was originally isolated from gastric biopsy specimens of a urea breath test-negative Japanese patient suffering from nodular gastritis.

Identifiers

PMID27609915
PMCPMC5017220
OpenAlexW2510501529

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.