Evidence map›Paper›PMID 27606703›Full record

ArticlePloS one2016

Novel Bovine Papillomavirus Type Discovered by Rolling-Circle Amplification Coupled with Next-Generation Sequencing.

Flavio R C da Silva, Samuel P Cibulski, Cíntia Daudt, Matheus N Weber, Lorena L B Guimarães, André F Streck, Fabiana Q Mayer, Paulo M Roehe, Cláudio W Canal

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Frontiers in veterinary science · 2021
    Review
  7. Canine papillomavirus type 16 associated to squamous cell carcinoma in a dog: virological and pathological findings.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Clinicopathological characteristics and papillomavirus types in cutaneous warts in bovine.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Papillomaviruses: a systematic review.Genetics and molecular biology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Flavio R C da SilvaLaboratório de Virologia - Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Samuel P CibulskiLaboratório de Virologia - Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Cíntia DaudtLaboratório de Virologia - Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Matheus N WeberLaboratório de Virologia - Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Lorena L B GuimarãesLaboratório de Virologia - Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
André F StreckUniversidade de Caxias do Sul, Caxias do Sul, Rio Grande do Sul, Brazil.
Fabiana Q MayerLaboratório de Biologia Molecular - Instituto de Pesquisas Veterinárias Desidério Finamor (IPVDF), Fundação Estadual de Pesquisa Agropecuária, Eldorado do Sul, Eldorado do Sul, Rio Grande do Sul, Brazil.
Paulo M RoeheDepartamento de Microbiologia Imunologia e Parasitologia - Laboratório de Virologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Cláudio W CanalLaboratório de Virologia - Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Universidade Federal do Rio Grande do Sul · BRFundação Estadual de Pesquisa Agropecuária · BRUniversidade de Caxias do Sul · BRUniversidade Federal do Acre · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Currently, fifteen bovine papillomavirus (BPV) types have been identified and classified into four genera: Deltapapillomavirus, Epsilonpapillomavirus, Dyoxipapillomavirus, and Xipapillomavirus. Here, the complete genome sequence of a new BPV type (BPV 04AC14) recovered from a papillomatous lesion is reported. The genome is 7,282 bp in length and exhibits the classic genetic organization and motifs of the members of Papillomaviridae. Maximum likelihood phylogenetic analyses revealed that BPV 04AC14 clusters with members of the Xipapillomavirus genus. The nucleotide sequence of the L1 capsid protein of the novel BPV is closely related to its counterpart, BPV3, with which it shares 79% similarity. These findings suggest that this virus is a new BPV type of the Xipapillomavirus genus.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCattleDNA, IntergenicEpitheliumGenome, ViralHigh-Throughput Nucleotide SequencingLikelihood FunctionsPapillomaviridaePhylogenyPolymerase Chain ReactionViral ProteinsDNA, IntergenicViral Proteins

Identifiers

PMID27606703
PMCPMC5015974
OpenAlexW2511474588

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.