Evidence map›Paper›PMID 27606604›Full record

ArticlePLoS biology2016

Conditional Creation and Rescue of Nipbl-Deficiency in Mice Reveals Multiple Determinants of Risk for Congenital Heart Defects.

Rosaysela Santos, Shimako Kawauchi, Russell E Jacobs, Martha E Lopez-Burks, Hojae Choi, Jamie Wikenheiser, Benedikt Hallgrimsson, Heather A Jamniczky, Scott E Fraser, Arthur D Lander and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. DecreasingScience advances · 2022
    Article
  11. Murine allele and transgene symbols: ensuring unique, concise, and informative nomenclature.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Three-dimensional chromatin organization in cardiac development and disease.Journal of molecular and cellular cardiology · 2021
    Review
  16. Review
  17. Article
  18. The developmental-genetics of canalization.Seminars in cell & developmental biology · 2019
    Review
  19. NIPBLScientific reports · 2018
    Article
  20. The Complex Genetic Basis of Congenital Heart Defects.Circulation journal : official journal of the Japanese Circulation Society · 2017
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Rosaysela SantosDepartment of Developmental and Cell Biology, University of California, Irvine, California, United States of America.
Shimako KawauchiDepartment of Developmental and Cell Biology, University of California, Irvine, California, United States of America.
Russell E JacobsBiological Imaging Center, Beckman Institute, California Institute of Technology, Pasadena, California, United States of America.
Martha E Lopez-BurksDepartment of Developmental and Cell Biology, University of California, Irvine, California, United States of America.
Hojae ChoiCenter for Complex Biological Systems, University of California, Irvine, California, United States of America.
Jamie WikenheiserDepartment of Anatomy and Neurobiology, University of California, Irvine, California, United States of America.
Benedikt HallgrimssonDepartment of Cell Biology and Anatomy, University of Calgary, Calgary, Alberta, Canada.
Heather A JamniczkyDepartment of Cell Biology and Anatomy, University of Calgary, Calgary, Alberta, Canada.
Scott E FraserDepartments of Biology and Bioengineering, University of Southern California, Los Angeles, California, United States of America.
Arthur D LanderCenter for Complex Biological Systems, University of California, Irvine, California, United States of America.
Anne L CalofDepartment of Developmental and Cell Biology, University of California, Irvine, California, United States of America.
University of California, Irvine · USImaging Center · USUniversity of Calgary · CAUniversity of Southern California · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
VERTEBRATE ANIMAL MODELS OF CORNELIA DE LANGE SYNDROMEP01HD052860 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI KRANTZ, IAN D. · 2006 to 2015
$11.2M
Multimodal mPET &mMRI Imaging InstrumentationR01EB000993 · NIBIB · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI CHERRY, SIMON R, JACOBS, RUSSELL E · 2004 to 2013
$9.2M
NCI NIH HHS P30 CA062203NIBIB NIH HHS R01 EB000993NICHD NIH HHS P01 HD052860
6 · The paper itself

Abstract

Elucidating the causes of congenital heart defects is made difficult by the complex morphogenesis of the mammalian heart, which takes place early in development, involves contributions from multiple germ layers, and is controlled by many genes. Here, we use a conditional/invertible genetic strategy to identify the cell lineage(s) responsible for the development of heart defects in a Nipbl-deficient mouse model of Cornelia de Lange Syndrome, in which global yet subtle transcriptional dysregulation leads to development of atrial septal defects (ASDs) at high frequency. Using an approach that allows for recombinase-mediated creation or rescue of Nipbl deficiency in different lineages, we uncover complex interactions between the cardiac mesoderm, endoderm, and the rest of the embryo, whereby the risk conferred by genetic abnormality in any one lineage is modified, in a surprisingly non-additive way, by the status of others. We argue that these results are best understood in the context of a model in which the risk of heart defects is associated with the adequacy of early progenitor cell populations relative to the sizes of the structures they must eventually form.

Indexed as

AnimalsCell Cycle ProteinsCell LineFemaleGene ExpressionGenetic Association StudiesGenetic Predisposition to DiseaseHaploinsufficiencyHeartHeart Septal Defects, AtrialHomeobox Protein Nkx-2.5MaleMice, TransgenicOrgan SpecificityPenetranceRisk FactorsCell Cycle ProteinsHomeobox Protein Nkx-2.5Nipbl protein, mouseNkx2-5 protein, mouseTranscription Factors

Identifiers

PMID27606604
PMCPMC5016002
OpenAlexW2507232658

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.