Evidence map›Paper›PMID 27605664›Full record

ArticleThe Journal of biological chemistry2016

The Mg2+-containing Water Cluster of Mammalian Cytochrome c Oxidase Collects Four Pumping Proton Equivalents in Each Catalytic Cycle.

Naomine Yano, Kazumasa Muramoto, Atsuhiro Shimada, Shuhei Takemura, Junpei Baba, Hidenori Fujisawa, Masao Mochizuki, Kyoko Shinzawa-Itoh, Eiki Yamashita, Tomitake Tsukihara and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Structural and functional mechanisms of cytochrome c oxidase.Journal of inorganic biochemistry · 2025
    Review
  5. Heme-copper and Heme OJournal of inorganic biochemistry · 2023
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Impact of Hydrogen Sulfide on Mitochondrial and Bacterial Bioenergetics.International journal of molecular sciences · 2021
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. A common coupling mechanism for A-type heme-copper oxidases from bacteria to mitochondria.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. X-ray structures of catalytic intermediates of cytochromeThe Journal of biological chemistry · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Naomine YanoFrom the Picobiology Institute and.
Kazumasa Muramotothe Department of Life Science, Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori, Akoh, Hyogo 678-1297.
Atsuhiro ShimadaFrom the Picobiology Institute and.
Shuhei TakemuraFrom the Picobiology Institute and.
Junpei BabaFrom the Picobiology Institute and.
Hidenori FujisawaFrom the Picobiology Institute and.
Masao MochizukiFrom the Picobiology Institute and.
Kyoko Shinzawa-ItohFrom the Picobiology Institute and.
Eiki Yamashitathe Institute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, and.
Tomitake TsukiharaFrom the Picobiology Institute and.
Shinya YoshikawaFrom the Picobiology Institute and yoshi@sci.u-hyogo.ac.jp.
Osaka University · JPUniversity of Hyogo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine heart cytochrome c oxidase (CcO) pumps four proton equivalents per catalytic cycle through the H-pathway, a proton-conducting pathway, which includes a hydrogen bond network and a water channel operating in tandem. Protons are transferred by H

Indexed as

Models, MolecularAnimalsCattleCrystallography, X-RayElectron Transport Complex IVMagnesiumProtein Structure, QuaternaryProton PumpsStructure-Activity RelationshipElectron Transport Complex IVMagnesiumProton Pumpsbioenergeticscoppercytochrome c oxidase (Complex IV)hememembrane proteinmitochondrial membrane potentialproton pumpx-ray crystallography

Identifiers

PMID27605664
PMCPMC5104913
OpenAlexW2518634742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.