Evidence map›Paper›PMID 27605490›Full record

ArticleScientific reports2016

Involvement of type VI secretion system in secretion of iron chelator pyoverdine in Pseudomonas taiwanensis.

Wen-Jen Chen, Tzu-Yen Kuo, Feng-Chia Hsieh, Pi-Yu Chen, Chang-Sheng Wang, Yu-Ling Shih, Ying-Mi Lai, Je-Ruei Liu, Yu-Liang Yang, Ming-Che Shih

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
14.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 79 citations in OpenAlex.

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  20. Evaluation of the Antifungal Activities ofJournal of fungi (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Wen-Jen ChenAgricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Tzu-Yen KuoAgricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Feng-Chia HsiehBiopesticide Division, Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Council of Agriculture, Taichung, 41358, Taiwan.
Pi-Yu ChenAgricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Chang-Sheng WangDepartment of Agronomy, National Chung Hsing University, Taichung, 40227, Taiwan.
Yu-Ling ShihInstitute of Biological Chemistry, Academia Sinica, Taipei, 11529, Taiwan.
Ying-Mi LaiAgricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Je-Ruei LiuAgricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Yu-Liang YangAgricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Ming-Che ShihAgricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Agricultural Biotechnology Research Center, Academia Sinica · TWNational Taiwan University · TWCouncil of Agriculture · TWInstitute of Biological Chemistry, Academia Sinica · TWNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice bacterial blight caused by Xanthomonas oryzae pv. oryzae (Xoo) is one of the most destructive rice diseases worldwide. Therefore, in addition to breeding disease-resistant rice cultivars, it is desirable to develop effective biocontrol agents against Xoo. Here, we report that a soil bacterium Pseudomonas taiwanensis displayed strong antagonistic activity against Xoo. Using matrix-assisted laser desorption/ionization imaging mass spectrometry, we identified an iron chelator, pyoverdine, secreted by P. taiwanensis that could inhibit the growth of Xoo. Through Tn5 mutagenesis of P. taiwanensis, we showed that mutations in genes that encode components of the type VI secretion system (T6SS) as well as biosynthesis and maturation of pyoverdine resulted in reduced toxicity against Xoo. Our results indicated that T6SS is involved in the secretion of endogenous pyoverdine. Mutations in T6SS component genes affected the secretion of mature pyoverdine from the periplasmic space into the extracellular medium after pyoverdine precursor is transferred to the periplasm by the inner membrane transporter PvdE. In addition, we also showed that other export systems, i.e., the PvdRT-OpmQ and MexAB-OprM efflux systems (for which there have been previous suggestions of involvement) and the type II secretion system (T2SS), are not involved in pyoverdine secretion.

Indexed as

Biological Control AgentsGenes, BacterialIron Chelating AgentsMutagenesisOligopeptidesOryzaPlant DiseasesPseudomonasSiderophoresType VI Secretion SystemsXanthomonasBiological Control AgentsIron Chelating AgentsOligopeptidespyoverdinSiderophoresType VI Secretion Systems

Identifiers

PMID27605490
PMCPMC5015096
OpenAlexW2516088774

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.