Evidence map›Paper›PMID 27602773›Full record

SynthesisOncotarget2016

Efficacy of D5F3 IHC for detecting ALK gene rearrangement in NSCLC patients: a systematic review and meta-analysis.

Hu Ma, Wen-Xiu Yao, Lang Huang, Su-Han Jin, Da-Hai Liu, Yuan Liu, Xu Tian, Jin-Hui Tian, Jian-Guo Zhou

Abstract readMeta-AnalysisSystematic Review
In one paragraph

Synthesis in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Genomic heterogeneity of ALK fusion breakpoints in non-small-cell lung cancer.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2018
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hu MaDepartment of Oncology, Affiliated Hospital of Zunyi Medical University, Zunyi 563000, China.
Wen-Xiu YaoDepartment of Oncology, Affiliated Cancer Hospital of Medical School, University of Electronic Science and Technology of China, Sichuan Cancer Hospital and Institute & Cancer, The Second People's Hospital of Sichuan Province, Chengdu, 610000, China.
Lang HuangDepartment of Oncology, Affiliated Hospital of Zunyi Medical University, Zunyi 563000, China.
Su-Han JinAffiliated Stemmatological Hospital of Zunyi Medical University, Zunyi 563000, China.
Da-Hai LiuDepartment of Oncology, Affiliated Hospital of Zunyi Medical University, Zunyi 563000, China.
Yuan LiuDepartment of Pharmacology and Key Laboratory of Basic Pharmacology of Ministry of Education, Zunyi Medical University, Zunyi 563000, China.
Xu TianChongqing Cancer Hospital and Institute, Chongqing, 40030, China.
Jin-Hui TianEvidence-Based Medicine Center of Lanzhou University, Lanzhou, 730000, China.
Jian-Guo ZhouDepartment of Oncology, Affiliated Hospital of Zunyi Medical University, Zunyi 563000, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We conducted a pooled analysis comparing the efficacy of an immunohistochemistry (IHC) assay using the D5F3 antibody with that of fluorescence in situ hybridization (FISH) for detecting ALK gene rearrangement in NSCLC patients. A total of 32 studies involving 5805 samples were included in this review. Pooled sensitivity for D5F3 IHC was 0.97 (95%CI: 0.93-0.98), specificity was 0.99 (95%CI: 0.98-1.00), PLR was 119.20 (95%CI: 57.79-245.89), NLR was 0.03 (95%CI: 0.02-0.07), DOR was 3526.66 (95%CI: 1344.71-9249.03), and AUROC was 1.00 (95%CI: 0.99-1.00). Meta-regression revealed that specimen type was a source of heterogeneity for specificity, and specimen type and FISH signal distance were sources of heterogeneity in the joint model. Subgroup analysis revealed that sensitivity and specificity were higher when the FISH signal distance standard was ≥ 2 than when it was ≥ 1. Sensitivity was higher for tumor specimens than for cell specimens; specificity was higher for cell specimens than for tumor specimens. In conclusion, the D5F3 IHC assay was nearly as effective as FISH for detection of ALK gene rearrangement in NSCLC patients.

Indexed as

Gene RearrangementAnaplastic Lymphoma KinaseAntibodiesCarcinoma, Non-Small-Cell LungHumansImmunohistochemistryIn Situ Hybridization, FluorescenceLung NeoplasmsReceptor Protein-Tyrosine KinasesALK protein, humanAnaplastic Lymphoma KinaseAntibodiesReceptor Protein-Tyrosine KinasesALKD5F3diagnostic accuracymeta-analysisNSCLC

Identifiers

PMID27602773
PMCPMC5342540

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.