Evidence map›Paper›PMID 27602726›Full record

ArticleBiophysical journal2016

The Charge Properties of Phospholipid Nanodiscs.

Cheng Her, Dana I Filoti, Mark A McLean, Stephen G Sligar, J B Alexander Ross, Harmen Steele, Thomas M Laue

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Structures and Dynamics of Anionic Lipoprotein Nanodiscs.The journal of physical chemistry. B · 2022
    Article
  9. Review
  10. Nanodiscs: A toolkit for membrane protein science.Protein science : a publication of the Protein Society · 2021
    Review
  11. Article
  12. The Human CytochromeBiochemistry · 2020
    Article
  13. Article
  14. Review
  15. Preparation of Lipid Nanodiscs with Lipid Mixtures.Current protocols in protein science · 2019
    Article
  16. Local membrane charge regulates βNature communications · 2019
    Article
  17. IgG Charge: Practical and Biological Implications.Antibodies (Basel, Switzerland) · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Cheng HerDepartment of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire. Electronic address: ccd35@wildcats.unh.edu.
Dana I FilotiDepartment of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire.
Mark A McLeanDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Champaign, Illinois.
Stephen G SligarDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Champaign, Illinois.
J B Alexander RossDepartment of Chemistry and Biochemistry, University of Montana, Missoula, Montana.
Harmen SteeleDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Champaign, Illinois.
Thomas M LaueDepartment of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire.
University of Illinois Urbana-Champaign · USUniversity of New Hampshire · USUniversity of Montana · US

Funding

Surveillance genome sequencing to detect SARS-CoV-2 virus variants in MontanaP20GM103546 · NIGMS · UNIVERSITY OF MONTANA · PI BOWLER, BRUCE E · 2012 to 2021
$19.2M
Nanoscale Approaches to Understanding Membrane Protein FunctionR35GM118145 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI STEPHEN G. SLIGAR · 2016 to 2026
$7.5M
Understanding the role of phospholipids in integrin signalingR01GM101048 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI SLIGAR, STEPHEN G. · 2012 to 2015
$1.1M
NIGMS NIH HHS P20 GM103546NIGMS NIH HHS R01 GM101048NIGMS NIH HHS R35 GM118145
6 · The paper itself

Abstract

Phospholipids (PLs) are a major, diverse constituent of cell membranes. PL diversity arises from the nature of the fatty acid chains, as well as the headgroup structure. The headgroup charge is thought to contribute to both the strength and specificity of protein-membrane interactions. Because it has been difficult to measure membrane charge, ascertaining the role charge plays in these interactions has been challenging. Presented here are charge measurements on lipid Nanodiscs at 20°C in 100 mM NaCl, 50 mM Tris, at pH 7.4. Values are also reported for measurements made in the presence of Ca(2+) and Mg(2+) as a function of NaCl concentration, pH, and temperature, and in solvents containing other types of cations and anions. Measurements were made for neutral (phosphatidylcholine and phosphatidylethanolamine) and anionic (phosphatidylserine, phosphatidic acid, cardiolipin, and phosphatidylinositol 4,5-bisphosphate (PIP2)) PLs containing palmitoyl-oleoyl and dimyristoyl fatty acid chains. In addition, charge measurements were made on Nanodiscs containing an Escherichia coli lipid extract. The data collected reveal that 1) POPE is anionic and not neutral at pH 7.4; 2) high-anionic-content Nanodiscs exhibit polyelectrolyte behavior; 3) 3 mM Ca(2+) neutralizes a constant fraction of the charge, but not a constant amount of charge, for POPS and POPC Nanodiscs; 4) in contrast to some previous work, POPC only interacts weakly with Ca(2+); 5) divalent cations interact with lipids in a lipid- and ion-specific manner for POPA and PIP2 lipids; and 6) the monovalent anion type has little influence on the lipid charge. These results should help eliminate inconsistencies among data obtained using different techniques, membrane systems, and experimental conditions, and they provide foundational data for developing an accurate view of membranes and membrane-protein interactions.

Indexed as

CalciumElectrophoresisEscherichia coliHydrogen-Ion ConcentrationIonsLipid BilayersMagnesiumNanostructuresPhase TransitionPhospholipidsTemperatureCalciumIonsLipid BilayersMagnesiumPhospholipids

Identifiers

PMID27602726
PMCPMC5018125
OpenAlexW2508510688

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.