Evidence map›Paper›PMID 27602173›Full record

ArticleClinical epigenetics2016

Donor age and C1orf132/MIR29B2C determine age-related methylation signature of blood after allogeneic hematopoietic stem cell transplantation.

Magdalena Spólnicka, Renata Zbieć Piekarska, Emilia Jaskuła, Grzegorz W Basak, Renata Jacewicz, Agnieszka Pięta, Żanetta Makowska, Maciej Jedrzejczyk, Agnieszka Wierzbowska, Agnieszka Pluta and 6 more

Erratum issuedOpen access · goldAbstract readLetterComment
In one paragraph

Article in Clinical epigenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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  10. Erratum to: Donor age andClinical epigenetics · 2016
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 1 country.

Magdalena SpólnickaBiology Department, Central Forensic Laboratory of the Police, Warsaw, 00-583 Poland.
Renata Zbieć PiekarskaBiology Department, Central Forensic Laboratory of the Police, Warsaw, 00-583 Poland.
Emilia JaskułaL. Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw, 53-114 Poland ; Lower Silesian Center for Cellular Transplantation with National Bone Marrow Donor Registry, Wroclaw, 53-439 Poland.
Grzegorz W BasakDepartment of Hematology, Oncology and Internal Diseases, The Medical University of Warsaw, Warsaw, 02-097 Poland.
Renata JacewiczDepartment of Forensic Medicine, Medical and Forensic Genetics Laboratory, Medical University of Lodz, Lodz, 91-304 Poland.
Agnieszka PiętaBiology Department, Central Forensic Laboratory of the Police, Warsaw, 00-583 Poland.
Żanetta MakowskaBiology Department, Central Forensic Laboratory of the Police, Warsaw, 00-583 Poland.
Maciej JedrzejczykDepartment of Forensic Medicine, Medical and Forensic Genetics Laboratory, Medical University of Lodz, Lodz, 91-304 Poland.
Agnieszka WierzbowskaDepartment of Hematology, Medical University of Lodz, Copernicus Memorial Hospital, Lodz, 93-510 Poland.
Agnieszka PlutaDepartment of Hematology, Medical University of Lodz, Copernicus Memorial Hospital, Lodz, 93-510 Poland.
Tadeusz RobakDepartment of Hematology, Medical University of Lodz, Copernicus Memorial Hospital, Lodz, 93-510 Poland.
Jarosław BerentDepartment of Forensic Medicine, Medical and Forensic Genetics Laboratory, Medical University of Lodz, Lodz, 91-304 Poland.
Wojciech BranickiMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, 30-387 Poland.
Wiesław JędrzejczakDepartment of Hematology, Oncology and Internal Diseases, The Medical University of Warsaw, Warsaw, 02-097 Poland.
Andrzej LangeLower Silesian Center for Cellular Transplantation with National Bone Marrow Donor Registry, Wroclaw, 53-439 Poland.
Rafał PłoskiDepartment of Medical Genetics, Warsaw Medical University, Pawińskiego 3c, Warsaw, PL 02-106 Poland.
Medical University of Lodz · PLCentralne Laboratorium Kryminalistyczne Policji · PLMedical University of Warsaw · PLCopernicus Memorial Hospital · PLJagiellonian University · PLPolish Academy of Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOur recent study demonstrated that DNA methylation status in a set of CpGs located in ELOVL2, C1orf132, TRIM59, KLF14, and FHL2 can accurately predict calendar age in blood. In the present work, we used these markers to evaluate the effect of allogeneic hematopoietic stem cell transplantation (HSCT) on the age-related methylation signature of human blood.

methodsDNA methylation in 32 CpGs was investigated in 16 donor-recipient pairs using pyrosequencing. DNA was isolated from the whole blood collected from recipients 27-360 days (mean 126) after HSCT and from the donors shortly before the HSCT.

resultsIt was found that in the recipients, the predicted age did not correlate with their calendar age but was correlated with the calendar age (r = 0.94, p = 4 × 10(-8)) and predicted age (r = 0.97, p = 5 × 10(-10)) of a respective donor. Despite this strong correlation, the predicted age of a recipient was consistently lower than the predicted age of a donor by 3.7 years (p = 7.8 × 10(-4)). This shift was caused by hypermethylation of the C1orf132 CpGs, for C1orf132 CpG_1. Intriguingly, the recipient-donor methylation difference correlated with calendar age of the donor (r = 0.76, p = 6 × 10(-4)). This finding could not trivially be explained by shifts of the major cellular factions of blood.

conclusionsWe confirm the single previous report that after HSCT, the age of the donor is the major determinant of age-specific methylation signature in recipient's blood. A novel finding is the unique methylation dynamics of C1orf132 which encodes MIR29B2C implicated in the self-renewing of hematopoietic stem cells. This observation suggests that C1orf132 could influence graft function after HSCT.

Indexed as

Hematopoietic Stem Cell TransplantationTissue DonorsDNA MethylationHumansAgingAllogeneic hematopoietic stem cell transplantationDNA methylationMIR29B2CRejuvenation

Identifiers

PMID27602173
PMCPMC5012039
OpenAlexW2507643629

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.