ArticleScientific reports2016
Identification of SET Domain-Containing Proteins in Gossypium raimondii and Their Response to High Temperature Stress.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Research on the regulation mechanism of drought tolerance in wheat.Plant cell reports · 2025Review
- H3K36 methyltransferase GhKMT3;1a and GhKMT3;2a promote flowering in upland cotton.BMC plant biology · 2024Article
- Genome-wide identification and expression analysis of the SET domain-containing gene family in potato (Solanum tuberosum L.).BMC genomics · 2024Article
- Identification of thePlants (Basel, Switzerland) · 2024Article
- Unraveling the genetic and molecular basis of heat stress in cotton.Frontiers in genetics · 2024Review
- Genome-wide analysis of SET domain genes and the function of GhSDG51 during salt stress in upland cotton (Gossypium hirsutum L.).BMC plant biology · 2023Article
- Identification of watermelon H3K4 and H3K27 genes and their expression profiles during watermelon fruit development.Molecular biology reports · 2023Article
- Comprehensive molecular evaluation of the histone methyltransferase gene family and their important roles in two-line hybrid wheat.BMC plant biology · 2022Article
- Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis.Communications biology · 2022Article
- Genome-Wide Identification and Characterization of SET Domain Family Genes inInternational journal of molecular sciences · 2022Article
- Systematic analysis of CCCH zinc finger family in Brassica napus showed that BnRR-TZFs are involved in stress resistance.BMC plant biology · 2021Article
- Genome-wide analysis of SET-domain group histone methyltransferases in apple reveals their role in development and stress responses.BMC genomics · 2021Article
- The function of histone lysine methylation related SET domain group proteins in plants.Protein science : a publication of the Protein Society · 2020Review
- Different MicroRNA Families Involved in Regulating High Temperature Stress Response during Cotton (International journal of molecular sciences · 2020Article
- Genome-wide identification and expression profiling of SET DOMAIN GROUP family in Dendrobium catenatum.BMC plant biology · 2020Article
- Stress Memory in Seagrasses: First Insight Into the Effects of Thermal Priming and the Role of Epigenetic Modifications.Frontiers in plant science · 2020Article
- Genome-wide analysis and stress-responsive expression of CCCH zinc finger family genes in Brassica rapa.BMC plant biology · 2018Article
- Insights into the cotton anther development through association analysis of transcriptomic and small RNA sequencing.BMC plant biology · 2018Article
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7 authors.
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Abstract
SET (Su(var), E(z), and Trithorax) domain-containing proteins play an important role in plant development and stress responses through modifying lysine methylation status of histone. Gossypium raimondii may be the putative contributor of the D-subgenome of economical crops allotetraploid G. hirsutum and G. barbadense and therefore can potentially provide resistance genes. In this study, we identified 52 SET domain-containing genes from G. raimondii genome. Based on conserved sequences, these genes are grouped into seven classes and are predicted to catalyze the methylation of different substrates: GrKMT1 for H3K9me, GrKMT2 and GrKMT7 for H3K4me, GrKMT3 for H3K36me, GrKMT6 for H3K27me, but GrRBCMT and GrS-ET for nonhistones substrate-specific methylation. Seven pairs of GrKMT and GrRBCMT homologous genes are found to be duplicated, possibly one originating from tandem duplication and five from a large scale or whole genome duplication event. The gene structure, domain organization and expression patterns analyses suggest that these genes' functions are diversified. A few of GrKMTs and GrRBCMTs, especially for GrKMT1A;1a, GrKMT3;3 and GrKMT6B;1 were affected by high temperature (HT) stress, demonstrating dramatically changed expression patterns. The characterization of SET domain-containing genes in G. raimondii provides useful clues for further revealing epigenetic regulation under HT and function diversification during evolution.
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