Evidence map›Paper›PMID 27601130›Full record

ArticleBiochemistry2016

Holo Structure and Steady State Kinetics of the Thiazolinyl Imine Reductases for Siderophore Biosynthesis.

Kathleen M Meneely, Trey A Ronnebaum, Andrew P Riley, Thomas E Prisinzano, Audrey L Lamb

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kathleen M MeneelyDepartment of Molecular Biosciences, ‡Department of Chemistry, and §Department of Medicinal Chemistry, University of Kansas , Lawrence, Kansas 66045, United States.
Trey A RonnebaumDepartment of Molecular Biosciences, ‡Department of Chemistry, and §Department of Medicinal Chemistry, University of Kansas , Lawrence, Kansas 66045, United States.
Andrew P RileyDepartment of Molecular Biosciences, ‡Department of Chemistry, and §Department of Medicinal Chemistry, University of Kansas , Lawrence, Kansas 66045, United States.
Thomas E PrisinzanoDepartment of Molecular Biosciences, ‡Department of Chemistry, and §Department of Medicinal Chemistry, University of Kansas , Lawrence, Kansas 66045, United States.
Audrey L LambDepartment of Molecular Biosciences, ‡Department of Chemistry, and §Department of Medicinal Chemistry, University of Kansas , Lawrence, Kansas 66045, United States.
University of Kansas · US

Funding

TRAINING GRANT IN DYNAMIC ASPECTS OF CHEMICAL BIOLOGYT32GM008545 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 1994 to 2019
$4.9M
Salicylate production in siderophore biosynthesisR01AI077725 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 2009 to 2012
$1.2M
Avance II 500 High Performance Digital NMR Spectrometer SystemS10RR024664 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI VANDERVELDE, DAVID G · 2007 to 2007
$468k
Structure-function analyses of siderophore biosynthetic enzymesK02AI093675 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 2011 to 2014
$428k
NCRR NIH HHS S10 RR024664NIAID NIH HHS K02 AI093675NIAID NIH HHS R01 AI077725NIGMS NIH HHS T32 GM008545
6 · The paper itself

Abstract

Thiazolinyl imine reductases catalyze the NADPH-dependent reduction of a thiazoline to a thiazolidine, a required step in the formation of the siderophores yersiniabactin (Yersinia spp.) and pyochelin (Pseudomonas aeruginosa). These stand-alone nonribosomal peptide tailoring domains are structural homologues of sugar oxidoreductases. Two closed structures of the thiazolinyl imine reductase from Yersinia enterocolitica (Irp3) are presented here: an NADP(+)-bound structure to 1.45 Å resolution and a holo structure to 1.28 Å resolution with NADP(+) and a substrate analogue bound. Michaelis-Menten kinetics were measured using the same substrate analogue and the homologue from P. aeruginosa, PchG. The data presented here support the hypothesis that tyrosine 128 is the likely general acid residue for catalysis and also highlight the phosphopantetheine tunnel for tethering of the substrate to the nonribosomal peptide synthetase module during assembly line biosynthesis of the siderophore.

Indexed as

Crystallography, X-RayKineticsMass SpectrometryNuclear Magnetic Resonance, BiomolecularOxidoreductasesProtein ConformationSiderophoresOxidoreductasesSiderophores

Identifiers

PMID27601130
PMCPMC5046821
OpenAlexW2513539820

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.