Evidence map›Paper›PMID 27599826›Full record

ArticleJournal of hepatology2017

Continuous de novo generation of spatially segregated hepatitis C virus replication organelles revealed by pulse-chase imaging.

Hongliang Wang, Andrew W Tai

Abstract read
In one paragraph

Article in Journal of hepatology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  9. Whole Lotta Lipids-from HCV RNA Replication to the Mature Viral Particle.International journal of molecular sciences · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Hongliang WangDivision of Gastroenterology, Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, MI, United States.
Andrew W TaiDivision of Gastroenterology, Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, MI, United States; Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, United States; Medicine Service, Ann Arbor Veterans Administration Health System, Ann Arbor, MI, United States. Electronic address: andrewwt@med.umich.edu.
University of Michigan–Ann Arbor · US

Funding

University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OWYANG, CHUNG · 1986 to 2021
$22.5M
Subversion of hepatocyte phosphoinositide metabolism by hepatitis C virusR01DK097374 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TAI, ANDREW W. · 2013 to 2017
$1.7M
NIDDK NIH HHS P30 DK034933NIDDK NIH HHS R01 DK097374
6 · The paper itself

Abstract

BACKGROUND &

aimsLike all positive-sense RNA viruses, hepatitis C virus (HCV) induces host membrane alterations for its replication. In chronically infected cells, it is not known whether these viral replication organelles are being continually resupplied by newly synthesized viral proteins in situ, or whether they are generated de novo. Here we aimed to study temporal events in replication organelles formation and maturation.

methodsHere we use pulse-chase labeling in combination with confocal microscopy, correlative light electron microscopy and biochemical methods to identify temporally distinct populations of replication organelles in living cells and study the formation, morphogenesis as well as compositional and functional changes of replication organelles over time.

resultsWe found that HCV replication organelles are continuously generated de novo at spatially distinct sites from preformed ones. This process is accompanied by accumulated intracellular membrane alteration, increased cholesterol delivery, NS5A phosphorylation, and positive-strand RNA content, and by eventual association with HCV core protein around lipid droplets. Generation of spatially segregated foci requires viral NS5A and the host factors phosphatidylinositol 4-kinase and oxysterol-binding protein, while association of foci with lipid droplets requires cholesterol.

conclusionsOur results reveal that HCV replication organelles are not static structures, but instead are continuously generated and dynamically change in composition and possibly also in function. LAY SUMMARY: Hepatitis C virus replication membrane structures are continuously generated at spatially distinct sites. New replication organelles are different in composition, and possibly also in function, compared to old replication organelles.

Indexed as

Hepacivirus1-Phosphatidylinositol 4-KinaseCholesterolHepatitis CHumansIntracellular MembranesOrganellesOxysterol Binding ProteinsReceptors, SteroidRNA-Dependent RNA PolymeraseRNA, ViralViral Nonstructural ProteinsVirology1-Phosphatidylinositol 4-KinaseCholesterolNS-5 protein, hepatitis C virusOxysterol Binding ProteinsReceptors, SteroidRNA-Dependent RNA PolymeraseRNA, ViralViral Nonstructural ProteinsCholesterolDouble membrane vesiclesHepatitis C virusOrganellesPulse-chase imagingSNAPViral replication

Identifiers

PMID27599826
PMCPMC5167665
OpenAlexW2509539954

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.