Evidence map›Paper›PMID 27598694›Full record

ArticleAnnals of the New York Academy of Sciences2017

Correlating eligibility criteria generalizability and adverse events using Big Data for patients and clinical trials.

Anando Sen, Patrick B Ryan, Andrew Goldstein, Shreya Chakrabarti, Shuang Wang, Eileen Koski, Chunhua Weng

Abstract read
In one paragraph

Article in Annals of the New York Academy of Sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. From clinical trials to clinical practice: How long are drugs tested and then used by patients?Journal of the American Medical Informatics Association : JAMIA · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. [Analysis of clinical efficacy, safety and prognosis of anlotinib hydrochloride in the treatment of advanced primary liver cancer].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2020
    Article
  10. Article
  11. Assessing the Validity of aAMIA ... Annual Symposium proceedings. AMIA Symposium · 2019
    Article
  12. The representativeness of eligible patients in type 2 diabetes trials: a case study using GIST 2.0.Journal of the American Medical Informatics Association : JAMIA · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anando SenDepartment of Biomedical Informatics, Columbia University, New York, New York.
Patrick B RyanDepartment of Biomedical Informatics, Columbia University, New York, New York.
Andrew GoldsteinDepartment of Biomedical Informatics, Columbia University, New York, New York.
Shreya ChakrabartiDepartment of Biomedical Informatics, Columbia University, New York, New York.
Shuang WangDepartment of Biostatistics, Columbia University, New York, New York.
Eileen KoskiCenter for Computational Health, IBM T.J. Watson Research Center, Yorktown Heights, New York.
Chunhua WengDepartment of Biomedical Informatics, Columbia University, New York, New York.

Funding

Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Clinical and Translational Science AwardUL1TR000040 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2012 to 2015
$26.2M
OMOP information model for eMERGE phenotypingU01HG008680 · NHGRI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Wendy K Chung, GEORGE M HRIPCSAK · 2015 to 2026
$13.3M
Bridging the Semantic Gap Between Research Eligibility Criteria and Clinical DataR01LM009886 · NLM · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WENG, CHUNHUA · 2009 to 2020
$5.3M
NCATS NIH HHS UL1 TR000040NCATS NIH HHS UL1 TR001873NHGRI NIH HHS U01 HG008680NLM NIH HHS R01 LM009886
6 · The paper itself

Abstract

Randomized controlled trials can benefit from proactive assessment of how well their participant selection strategies during the design of eligibility criteria can influence the study generalizability. In this paper, we present a quantitative metric called generalizability index for study traits 2.0 (GIST 2.0) to assess the a priori generalizability (based on population representativeness) of a clinical trial by accounting for the dependencies among multiple eligibility criteria. The metric was evaluated on 16 sepsis trials identified from ClinicalTrials.gov, with their adverse event reports extracted from the trial results sections. The correlation between GIST scores and adverse events was analyzed. We found that the GIST 2.0 score was significantly correlated with total adverse events and serious adverse events (weighted correlation coefficients of 0.825 and 0.709, respectively, with P < 0.01). This study exemplifies the promising use of Big Data in electronic health records and ClinicalTrials.gov for optimizing eligibility criteria design for clinical studies.

Indexed as

Patient SelectionAdultAnti-Infective AgentsClinical Trials as TopicComputational BiologyData MiningElectronic Health RecordsHumansSepsisSoftwareSystemic Inflammatory Response SyndromeTranslational Research, BiomedicalAnti-Infective Agentsadverse eventsclinical trialseligibility criteriageneralizabilitypopulation representativenesstrait dependencies

Identifiers

PMID27598694
PMCPMC5266625

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.