Evidence map›Paper›PMID 27598166›Full record

ArticleSensors (Basel, Switzerland)2016

Characterization of the ER-Targeted Low Affinity Ca(2+) Probe D4ER.

Elisa Greotti, Andrea Wong, Tullio Pozzan, Diana Pendin, Paola Pizzo

Open access · goldAbstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Luminal transport through intact endoplasmic reticulum limits the magnitude of localized CaProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Generation and Characterization of a New FRET-Based CaInternational journal of molecular sciences · 2021
    Article
  7. Article
  8. Mitochondrial CaCells · 2021
    Review
  9. Article
  10. Reduced reticulum-mitochondria CaBasic research in cardiology · 2020
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Exploring cells with targeted biosensors.The Journal of general physiology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Elisa GreottiDepartment of Biomedical Sciences, University of Padua, Via U. Bassi 58/B, Padua 35121, Italy. e.greotti@gmail.com.
Andrea WongDepartment of Biomedical Sciences, University of Padua, Via U. Bassi 58/B, Padua 35121, Italy. andreakuancie.wong@gmail.com.
Tullio PozzanDepartment of Biomedical Sciences, University of Padua, Via U. Bassi 58/B, Padua 35121, Italy. tullio.pozzan@unipd.it.
Diana PendinDepartment of Biomedical Sciences, University of Padua, Via U. Bassi 58/B, Padua 35121, Italy. diana.pendin@unipd.it.
Paola PizzoDepartment of Biomedical Sciences, University of Padua, Via U. Bassi 58/B, Padua 35121, Italy. paola.pizzo@unipd.it.
University of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium ion (Ca(2+)) is a ubiquitous intracellular messenger and changes in its concentration impact on nearly every aspect of cell life. Endoplasmic reticulum (ER) represents the major intracellular Ca(2+) store and the free Ca(2+) concentration ([Ca(2+)]) within its lumen ([Ca(2+)]ER) can reach levels higher than 1 mM. Several genetically-encoded ER-targeted Ca(2+) sensors have been developed over the last years. However, most of them are non-ratiometric and, thus, their signal is difficult to calibrate in live cells and is affected by shifts in the focal plane and artifactual movements of the sample. On the other hand, existing ratiometric Ca(2+) probes are plagued by different drawbacks, such as a double dissociation constant (Kd) for Ca(2+), low dynamic range, and an affinity for the cation that is too high for the levels of [Ca(2+)] in the ER lumen. Here, we report the characterization of a recently generated ER-targeted, Förster resonance energy transfer (FRET)-based, Cameleon probe, named D4ER, characterized by suitable Ca(2+) affinity and dynamic range for monitoring [Ca(2+)] variations within the ER. As an example, resting [Ca(2+)]ER have been evaluated in a known paradigm of altered ER Ca(2+) homeostasis, i.e., in cells expressing a mutated form of the familial Alzheimer's Disease-linked protein Presenilin 2 (PS2). The lower Ca(2+) affinity of the D4ER probe, compared to that of the previously generated D1ER, allowed the detection of a conspicuous, more clear-cut, reduction in ER Ca(2+) content in cells expressing mutated PS2, compared to controls.

Indexed as

CalciumCameleonEndoplasmic reticulumFRET-based probePresenilin

Identifiers

PMID27598166
PMCPMC5038697
OpenAlexW2507382411

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.