ArticleVirology2016
A +1 ribosomal frameshifting motif prevalent among plant amalgaviruses.
Article in Virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
36 citing papers in PubMed.
- Genomic Characterization of a Novel Victorivirus Detected in a Sample Derived From a Human-Biting Tick in Japan.Microbiology and immunology · 2026Article
- Transcriptome mining expands the diversity of Antonospora locustae virus 1-like viruses in the family Amalgaviridae.Virus genes · 2026Article
- Plant transcriptome data mining identified twenty-two putative novel taxa in the family Closteroviridae.Archives of virology · 2026Article
- Metagenomic screening of the virome of symptomatic tomato plants from La Réunion Island uncovers a complex of viruses including a newly identified whitefly-transmitted polerovirus.Archives of virology · 2026Article
- Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Fungal and Protist Viruses Subcommittee, 2025.The Journal of general virology · 2025Article
- Integrating Sequence- and Structure-Based Similarity Metrics for the Demarcation of Multiple Viral Taxonomic Levels.Viruses · 2025Article
- Identification of nine putative novel members of plant-infecting alphaflexiviruses in public domain plant transcriptomes.Virusdisease · 2024Article
- Discovery and genomic characterization of three double-stranded RNA viruses coinfecting Conidiobolus taihushanensis.Archives of virology · 2024Article
- Complete genome sequence of a novel amalgavirus in sponge gourd, Luffa cylindrica.Archives of virology · 2024Article
- Probing of plant transcriptomes reveals the hidden genetic diversity of the family Secoviridae.Archives of virology · 2024Article
- Diverse RNA viruses discovered in multiple seagrass species.PloS one · 2024Article
- Molecular characterization of a novel amalgavirus infecting lilium spp. in China.Archives of virology · 2023Article
- Carrot populations in France and Spain host a complex virome rich in previously uncharacterized viruses.PloS one · 2023Article
- Transcriptome Mining Expands Knowledge of RNA Viruses across the Plant Kingdom.Journal of virology · 2022Article
- A Novel Flavi-like Virus in Alfalfa (Viruses · 2022Article
- Infection ofViruses · 2022Article
- Virome ofFrontiers in microbiology · 2022Article
- Towards the Forest Virome: High-Throughput Sequencing Drastically Expands Our Understanding on Virosphere in Temperate Forest Ecosystems.Microorganisms · 2021Review
- RNA-seq reveals plant virus composition and diversity in alfalfa, thrips, and aphids in Beijing, China.Archives of virology · 2021Article
- Persistent Southern Tomato Virus (STV) Interacts with Cucumber Mosaic and/or Pepino Mosaic Virus in Mixed- Infections Modifying Plant Symptoms, Viral Titer and Small RNA Accumulation.Microorganisms · 2021Article
Corrections and comments
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Authors and funding
3 authors.
Funding
Abstract
Sequence accessions attributable to novel plant amalgaviruses have been found in the Transcriptome Shotgun Assembly database. Sixteen accessions, derived from 12 different plant species, appear to encompass the complete protein-coding regions of the proposed amalgaviruses, which would substantially expand the size of genus Amalgavirus from 4 current species. Other findings include evidence for UUU_CGN as a +1 ribosomal frameshifting motif prevalent among plant amalgaviruses; for a variant version of this motif found thus far in only two amalgaviruses from solanaceous plants; for a region of α-helical coiled coil propensity conserved in a central region of the ORF1 translation product of plant amalgaviruses; and for conserved sequences in a C-terminal region of the ORF2 translation product (RNA-dependent RNA polymerase) of plant amalgaviruses, seemingly beyond the region of conserved polymerase motifs. These results additionally illustrate the value of mining the TSA database and others for novel viral sequences for comparative analyses.
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