Evidence map›Paper›PMID 27595557›Full record

ArticleChembiochem : a European journal of chemical biology2016

Metabolic Incorporation of Azide Functionality into Cellular RNA.

Sarah Nainar, Samantha Beasley, Michael Fazio, Miles Kubota, Nan Dai, Ivan R Corrêa, Robert C Spitale

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Live-Cell RNA Imaging via Clickable TriPPPro Nucleotide Reporters.Angewandte Chemie (International ed. in English) · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. aFundamental research · 2023
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Total RNA Synthesis and its Covalent Labeling Innovation.Topics in current chemistry (Cham) · 2022
    Review
  11. Review
  12. Bioorthogonal chemistry.Nature reviews. Methods primers · 2021
    Article
  13. Article
  14. Article
  15. RNA Targeting in Acute Myeloid Leukemia.ACS pharmacology & translational science · 2020
    Article
  16. Covalent labeling of nucleic acids.Chemical Society reviews · 2020
    Review
  17. Article
  18. Article
  19. A Pronucleotide Probe for Live-Cell Imaging of Protein AMPylation.Chembiochem : a European journal of chemical biology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sarah NainarDepartment of Pharmaceutical Sciences, University of California, 2403 Natural Sciences I, Irvine, CA 92617, USA.
Samantha BeasleyDepartment of Pharmaceutical Sciences, University of California, 2403 Natural Sciences I, Irvine, CA 92617, USA.
Michael FazioDepartment of Pharmaceutical Sciences, University of California, 2403 Natural Sciences I, Irvine, CA 92617, USA.
Miles KubotaDepartment of Pharmaceutical Sciences, University of California, 2403 Natural Sciences I, Irvine, CA 92617, USA.
Nan DaiNew England Biolabs, 240 County Road, Ipswich, MA 01938, USA.
Ivan R CorrêaNew England Biolabs, 240 County Road, Ipswich, MA 01938, USA.
Robert C SpitaleDepartment of Pharmaceutical Sciences, University of California, 2403 Natural Sciences I, Irvine, CA 92617, USA.

Funding

Cracking the RNA Localization CodeDP2GM119164 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI SPITALE, ROBERT C · 2015 to 2015
$2.2M
Epitranscriptomic mechanisms of fear-related learning and memoryR01MH109588 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI SPITALE, ROBERT C · 2016 to 2020
$1.9M
NIGMS NIH HHS DP2 GM119164NIMH NIH HHS R01 MH109588
6 · The paper itself

Abstract

Real-time tracking of RNA expression can provide insight into the mechanisms used to generate cellular diversity, as well as help determine the underlying causes of disease. Here we present the exploration of azide-modified nucleoside analogues and their ability to be metabolically incorporated into cellular RNA. We report robust incorporation of adenosine analogues bearing azide handles at both the 2'- and N6-positions; 5-methylazidouridine was not incorporated into cellular RNA. We further demonstrate selectivity of our adenosine analogues for transcription and polyadenylation. We predict that azidonucleosides will find widespread utility in examining RNA functions inside living cells, as well as in more complex systems such as tissues and living animals.

Indexed as

AdenosineAlkynesAzidesCatalysisCopperCycloaddition ReactionFluorescent DyesHeLa CellsHumansMicroscopy, FluorescenceNucleosidesRibonucleotide ReductasesRNAAdenosineAlkynesAzidesCopperFluorescent DyesNucleosidesRibonucleotide ReductasesRNAazidesimagingmodified nucleosidesRNA incorporationtranscription

Identifiers

PMID27595557
PMCPMC5115926

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.