ArticleNature genetics2016
The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection.
Article in Nature genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 278 papers, 1 of them a synthesis that pooled it.
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Who cites it
278 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-analysis of GWAS in canola blackleg (Leptosphaeria maculans) disease traits demonstrates increased power from imputed whole-genome sequence.Scientific reports · 2020Pooled it
- Genome-wide cyclin gene evolution in Arabidopsis and Brassica reveals polyploidization-driven duplication and flowering-time associations.Molecular genetics and genomics : MGG · 2026Article
- Regulatory divergence of homoeologs underlies network optimization for fiber improvement in domesticated cotton.Proceedings of the National Academy of Sciences of the United States of America · 2026Article
- Genomic analysis of 3,330 accessions provides insights into the evolutionary history and self-incompatibility locus of the Brassica A genome.Nature genetics · 2026Article
- Segregating BCMolecular breeding : new strategies in plant improvement · 2026Article
- Unveiling the Biosynthetic Mechanisms of Dietary Fiber in the Leaves and Stems of Mustard (Journal of agricultural and food chemistry · 2026Article
- HAM1 negatively regulates drought tolerance in Brassica juncea.BMC plant biology · 2026Article
- Complex Interplay of Tandem, Segmental, Whole Genome Duplication, and Re-organization Drives Expansion of SAUR Gene Family in Brassicaceae.Biochemical genetics · 2026Article
- Whole-genome sequencing revealed the genomic origin of Solanum demissum Lindl., a Mexican hexaploid wild potato species.BMC plant biology · 2026Article
- Genetic Origin ofPlants (Basel, Switzerland) · 2026Article
- Complete Chloroplast Genome Characteristics and Phylogenetic Analysis ofInternational journal of molecular sciences · 2026Article
- Genome-Wide Identification of theInternational journal of molecular sciences · 2026Article
- Chromosome-level genome assembly of Siberian kale (Brassica napus subsp. pabularia).Scientific data · 2026Article
- Remodeling of homoeolog expression bias buffers stress response in allotetraploid cotton.BMC plant biology · 2026Article
- Genome-Wide Identification and Characterization of the Calmodulin-Binding Transcription Activators (CAMTA) Gene Family inPlants (Basel, Switzerland) · 2026Article
- Population genomic insights into the domestication ofHorticulture research · 2026Article
- Genome-wide identification of ethylene receptor protein-coding gene families in wheat and their regulated expression during development and under multiple abiotic stresses.BMC plant biology · 2026Article
- Complete Mitochondrial Genome Sequence Structure and Phylogenetic Analysis of Choy Sum (International journal of molecular sciences · 2026Article
- Genome-wide systematic characterization ofPeerJ · 2026Article
- Beyond yellow: discovery and genetic dissection of an apricot petal color inFrontiers in plant science · 2026Article
218 more citing papers are in PubMed but not listed here.
Corrections and comments
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- Erratum issued
Authors and funding
21 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Brassica genus encompasses three diploid and three allopolyploid genomes, but a clear understanding of the evolution of agriculturally important traits via polyploidy is lacking. We assembled an allopolyploid Brassica juncea genome by shotgun and single-molecule reads integrated to genomic and genetic maps. We discovered that the A subgenomes of B. juncea and Brassica napus each had independent origins. Results suggested that A subgenomes of B. juncea were of monophyletic origin and evolved into vegetable-use and oil-use subvarieties. Homoeolog expression dominance occurs between subgenomes of allopolyploid B. juncea, in which differentially expressed genes display more selection potential than neutral genes. Homoeolog expression dominance in B. juncea has facilitated selection of glucosinolate and lipid metabolism genes in subvarieties used as vegetables and for oil production. These homoeolog expression dominance relationships among Brassicaceae genomes have contributed to selection response, predicting the directional effects of selection in a polyploid crop genome.
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