Evidence map›Paper›PMID 27594975›Full record

ArticleStandards in genomic sciences2016

Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?

Dony Chacko Mathew, Shou-Chen Lo, Gincy Marina Mathew, Kung-Hao Chang, Chieh-Chen Huang

Abstract readCase Reports
PubMed Full text at PMC Publisher
In one paragraph

Article in Standards in genomic sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Characterization of the Pyrroloquinoline Quinone ProducingInternational journal of molecular sciences · 2023
    Article
  3. Comparative Genomic Analyses of the GenusInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dony Chacko MathewDepartment of Lifesciences, National Chung Hsing University, 145 Xingda Road, Taichung, Taiwan.
Shou-Chen LoDepartment of Lifesciences, National Chung Hsing University, 145 Xingda Road, Taichung, Taiwan.
Gincy Marina MathewSchool of Biosciences, Mar Athanasios College for Advanced Studies (MACFAST) Biocampus, Tiruvalla, Kerala India.
Kung-Hao ChangDepartment of Lifesciences, National Chung Hsing University, 145 Xingda Road, Taichung, Taiwan.
Chieh-Chen HuangDepartment of Lifesciences, National Chung Hsing University, 145 Xingda Road, Taichung, Taiwan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mercury impacts the function and development of the central nervous system in both humans and wildlife by being a potent neurotoxin. Microbial bioremediation is an important means of remediation of mercury-contaminated soil. The rhizospheric Photobacterium halotolerans strain MELD1 was isolated from mercury and dioxin contaminated site from Tainan, Taiwan. It has been shown to reduce Hg(2+) to Hg(0). The 4,758,027 bp genome of P. halotolerans MELD1 has a G + C content of 50.88 % and contains 4198 protein-coding and 106 RNA genes. Genomic analysis revealed the presence of a number of interesting gene cluster that maybe involved in heavy metal resistance, rhizosphere competence and colonization of the host plant.

Indexed as

Glycine-BetaineHeavy metalsMercuryMer operonPhotobacterium halotoleransRhizosphereROS

Identifiers

PMID27594975
PMCPMC5009661

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.