Evidence map›Paper›PMID 27593947›Full record

ArticleJournal of the American Chemical Society2016

Helical Conformation in the CA-SP1 Junction of the Immature HIV-1 Lattice Determined from Solid-State NMR of Virus-like Particles.

Marvin J Bayro, Barbie K Ganser-Pornillos, Kaneil K Zadrozny, Mark Yeager, Robert Tycko

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. Synthesis ofMagnetic resonance in chemistry : MRC · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Effects of an HIV-1 maturation inhibitor on the structure and dynamics of CA-SP1 junction helices in virus-like particles.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Article
  15. High-sensitivity protein solid-state NMR spectroscopy.Current opinion in structural biology · 2019
    Review
  16. Maturation of retroviruses.Current opinion in virology · 2019
    Review
  17. International journal of molecular sciences · 2019
    Review
  18. Article
  19. MicroED structures of HIV-1 Gag CTD-SP1 reveal binding interactions with the maturation inhibitor bevirimat.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Marvin J BayroLaboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health , Bethesda, Maryland 20892-0520, United States.
Barbie K Ganser-PornillosDepartment of Molecular Physiology and Biological Physics, University of Virginia School of Medicine , Seridan G. Snyder Translational Research Building, 480 Ray C. Hunt Drive, Charlottesville, Virginia 22908, United States.
Kaneil K ZadroznyDepartment of Molecular Physiology and Biological Physics, University of Virginia School of Medicine , Seridan G. Snyder Translational Research Building, 480 Ray C. Hunt Drive, Charlottesville, Virginia 22908, United States.
Mark YeagerDepartment of Molecular Physiology and Biological Physics, University of Virginia School of Medicine , Seridan G. Snyder Translational Research Building, 480 Ray C. Hunt Drive, Charlottesville, Virginia 22908, United States.
Robert TyckoLaboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health , Bethesda, Maryland 20892-0520, United States.
University of Virginia · USNational Institute of Diabetes and Digestive and Kidney Diseases · US

Funding

X-ray Cryst. CoreP50GM082545 · NIGMS · UNIVERSITY OF UTAH · PI SUNDQUIST, WESLEY I. · 2007 to 2018
$51.1M
Structural biology of HIV buddingP01GM066521 · NIGMS · UNIVERSITY OF UTAH · PI SUNDQUIST, WESLEY IAN · 2002 to 2006
$6.6M
Structural Studies of HIV-1 Proteins by Solid State NMRZIADK075032 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI TYCKO, ROBERT · 2011 to 2021
$5.1M
Structure Analysis of Viral Assembly MechanismsR01GM066087 · NIGMS · UNIVERSITY OF VIRGINIA · PI YEAGER, MARK JAY · 2003 to 2014
$4.4M
STRUCTURE AND ASSEMBLY OF THE HIV1 CORER01AI045405 · NIAID · UNIVERSITY OF UTAH · PI SUNDQUIST, WESLEY IAN · 1999 to 2003
$1.0M
NIAID NIH HHS R01 AI045405NIGMS NIH HHS P01 GM066521NIGMS NIH HHS P50 GM082545NIGMS NIH HHS R01 GM066087
6 · The paper itself

Abstract

Maturation of HIV-1 requires disassembly of the Gag polyprotein lattice, which lines the viral membrane in the immature state, and subsequent assembly of the mature capsid protein lattice, which encloses viral RNA in the mature state. Metastability of the immature lattice has been proposed to depend on the existence of a structurally ordered, α-helical segment spanning the junction between capsid (CA) and spacer peptide 1 (SP1) subunits of Gag, a segment that is dynamically disordered in the mature capsid lattice. We report solid state nuclear magnetic resonance (ssNMR) measurements on the immature lattice in noncrystalline, spherical virus-like particles (VLPs) derived from Gag. The ssNMR data provide definitive evidence for this critical α-helical segment in the VLPs. Differences in ssNMR chemical shifts and signal intensities between immature and mature lattice assemblies also support a major rearrangement of intermolecular interactions in the maturation process, consistent with recent models from electron cryomicroscopy and X-ray crystallography.

Indexed as

Capsid ProteinsHIV-1Magnetic Resonance SpectroscopyModels, MolecularProtein ConformationVirus AssemblyCapsid Proteins

Identifiers

PMID27593947
PMCPMC5636003
OpenAlexW2517661386

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.