Evidence map›Paper›PMID 27592234›Full record

ArticleImmunologic research2016

Variants in LTA, TNF, IL1B and IL10 genes associated with the clinical course of sepsis.

Carolina Montoya-Ruiz, Fabián A Jaimes, Maria T Rugeles, Juan Álvaro López, Gabriel Bedoya, Paula A Velilla

Abstract read
PubMed Publisher
In one paragraph

Article in Immunologic research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 4 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 4 syntheses or guidelines pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Association between the Lymphotoxin-BioMed research international · 2020
    Pooled it
  5. Trial
  6. Article
  7. Association ofFrontiers in neuroscience · 2023
    Article
  8. Article
  9. Article
  10. Can we Reconcile Evidence-based Medicine with Personalized Medicine: Poised on a Cusp!Indian journal of critical care medicine : peer-reviewed, official publication of Indian Society of Critical Care Medicine · 2022
    Article
  11. Article
  12. Article
  13. The rs8506 TT Genotype inFrontiers in public health · 2022
    Article
  14. Article
  15. TheInnate immunity · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Carolina Montoya-RuizGrupo Inmunovirología, Facultad de Medicina, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia.ORCID 0000-0002-4847-3021
Fabián A JaimesGrupo Académico de Epidemiologia Clínica, Facultad de Medicina, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia.
Maria T RugelesGrupo Inmunovirología, Facultad de Medicina, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia.
Juan Álvaro LópezEscuela de Microbiología, Grupo Inmunodeficiencias Primarias-Facultad de Medicina, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia.
Gabriel BedoyaGrupo Genética Molecular, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia.
Paula A VelillaGrupo Inmunovirología, Facultad de Medicina, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia. paula.velilla@udea.edu.co.
Universidad de Antioquia · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to explore the association between some SNPs of the TNF, LTA, IL1B and IL10 genes with cytokine concentrations and clinical course in Colombian septic patients. We conducted a cross-sectional study to genotype 415 septic patients and 205 patients without sepsis for the SNPs -308(G/A) rs1800629 of TNF; +252 (G/A) rs909253 of LTA; -511(A/G) rs16944 and +3953(C/T) rs1143634 of IL1B; and -1082(A/G) rs1800896, -819(C/T) rs1800871 and -592(C/A) rs1800872 of IL10. The association of theses SNPs with the following parameters was evaluated: (1) the presence of sepsis; (2) severity and clinical outcomes; (3) APACHE II and SOFA scores; and (4) procalcitonin, C-reactive protein, tumor necrosis factor, lymphotoxin alpha, interleukin 1 beta and interleukin 10 plasma concentrations. We found an association between the SNP LTA +252 with the development of sepsis [OR 1.29 (1.00-1.68)]; the SNP IL10 -1082 with sepsis severity [OR 0.53 (0.29-0.97)]; the TNF -308 with mortality [OR 0.33 (0.12-0.95)]; and the IL10 -592 and IL10 -1082 with admission to the intensive care unit (ICU) [OR 3.36 (1.57-7.18)] and [OR 0.18 (0.04-0.86)], respectively. None of the SNPs were associated with cytokine levels, procalcitonin and C-reactive protein serum concentrations, nor with APACHE II and SOFA scores. Our results suggest that these genetic variants play an important role in the development of sepsis and its clinical course.

Indexed as

CalcitoninColombiaC-Reactive ProteinCritical CareCross-Sectional StudiesDisease ProgressionGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansInterleukin-10Interleukin-1betaLymphotoxin-alphaPolymorphism, Single NucleotideSepsisSurvival AnalysisCalcitoninC-Reactive ProteinInterleukin-10Interleukin-1betaLymphotoxin-alphaTumor Necrosis Factor-alphaColombian populationCross-sectional studyCytokinesInfectionSepsisSIRSSNP

Identifiers

PMID27592234
OpenAlexW2510731984

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.