Evidence map›Paper›PMID 27590193›Full record

ArticleHistochemistry and cell biology2016

Three-dimensional and immune electron microscopic analysis of the secretory pathway in Saccharomyces cerevisiae.

Galina V Beznoussenko, Antonella Ragnini-Wilson, Cathal Wilson, Alexander A Mironov

Abstract read
PubMed Publisher
In one paragraph

Article in Histochemistry and cell biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. The 50-nm Free Vesicles Visible inCurrent issues in molecular biology · 2025
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  7. The Diffusion Model of Intra-Golgi Transport Has Limited Power.International journal of molecular sciences · 2023
    Article
  8. Effect of the First Feeding on Enterocytes of Newborn Rats.International journal of molecular sciences · 2022
    Article
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  10. Article
  11. The Golgi Apparatus and its Next-Door Neighbors.Frontiers in cell and developmental biology · 2022
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Spatiotemporal dissection of theJournal of cell science · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Galina V BeznoussenkoIstituto FIRC di Oncologia Molecolare (IFOM-IEO Campus), Via Adamello 16, 20139, Milan, Italy.
Antonella Ragnini-WilsonDepartment of Cell Biology and Oncology, Consorzio Mario Negri Sud, Via Nazionale 8/A, 66030, Santa Maria Imbaro, CH, Italy.
Cathal WilsonDepartment of Cell Biology and Oncology, Consorzio Mario Negri Sud, Via Nazionale 8/A, 66030, Santa Maria Imbaro, CH, Italy.
Alexander A MironovIstituto FIRC di Oncologia Molecolare (IFOM-IEO Campus), Via Adamello 16, 20139, Milan, Italy. alexandre.mironov@ifom.eu.
FIRC Institute of Molecular Oncology · ITMario Negri Sud Foundation · ITTelethon Institute Of Genetics And Medicine · ITUniversity of Rome Tor Vergata · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Until now, the mechanisms of ER-to-Golgi and intra-Golgi transport remain obscure. This is especially evident for the Golgi of S. cerevisiae where different Golgi compartments are not organized in stacks. Here, using improved sample preparation protocols, we examined the 3D organization of pre-Golgi and Golgi compartments and found several new features of the structures functioning along the secretory pathway. In the cytoplasmic sheet ER, we found narrow pores that aggregated near the rims, and tubular networks tightly interconnected with sheets of several cytoplasmic ER cisternae. Within the Golgi compartments, we found disks with wide pores, disks with narrow pores, and disk-like networks with varicosities or nodules at the point of branching and thick membranes. Sometimes, these compartments contained 30 nm buds coated with a clathrin-like coat. The lumen of these Golgi compartments was more osmiophilic than the lumen of the ER. In contrast to ER elements, Golgi compartments were isolated and in the majority of cases not connected, although we observed some connections between Golgi compartments and also between Golgi disks with wide pores and the ER. Two types of free vesicles of 35-40 and 45-50 nm were found, the former being sometimes partially coated with a clathrin-like coat. Sec31, a COPII component, was found near narrow pores in the cytoplasmic sheets of the ER, over edge aggregates of narrow pores, and within the ER network. The cis-Golgi marker Rer1p was detected on disks or semi-spheres with wide pores, while the medial Golgi marker Gos1p was found on disks or semi-spheres with narrow pores. Gos1p was found to be enriched on 45-50 nm vesicles, while Rer1p was depleted. The 35-40 nm vesicles did not show either label. These findings are discussed from the point of view of mechanisms of transport.

Indexed as

Imaging, Three-DimensionalSecretory PathwayEndoplasmic ReticulumGolgi ApparatusMicroscopy, ImmunoelectronSaccharomyces cerevisiaeCOPICOPIIGolgiIntra-Golgi transportS. cerevisiaeVesicles

Identifiers

PMID27590193
OpenAlexW2511783360

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.