Evidence map›Paper›PMID 27589271›Full record

ArticlePloS one2016

Identification and Characterization of a Novel Issatchenkia orientalis GPI-Anchored Protein, IoGas1, Required for Resistance to Low pH and Salt Stress.

Akinori Matsushika, Kanako Negi, Toshihiro Suzuki, Tetsuya Goshima, Tamotsu Hoshino

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Current and prospective therapeutic strategies: tacklingFrontiers in cellular and infection microbiology · 2023
    Review
  9. Article
  10. Engineering robust microorganisms for organic acid production.Journal of industrial microbiology & biotechnology · 2022
    Review
  11. Article
  12. The Glycosylphosphatidylinositol-Anchored Superoxide Dismutase ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  13. Review
  14. The Model SystemLife (Basel, Switzerland) · 2020
    Review
  15. Article
  16. A universal gene expression system for fungi.Nucleic acids research · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Akinori MatsushikaResearch Institute for Sustainable Chemistry (ISC), National Institute of Advanced Industrial Science and Technology (AIST), Hiroshima, Japan.
Kanako NegiResearch Institute for Sustainable Chemistry (ISC), National Institute of Advanced Industrial Science and Technology (AIST), Hiroshima, Japan.
Toshihiro SuzukiResearch Institute for Sustainable Chemistry (ISC), National Institute of Advanced Industrial Science and Technology (AIST), Hiroshima, Japan.
Tetsuya GoshimaNational Research Institute of Brewing (NRIB), Hiroshima, Japan.
Tamotsu HoshinoResearch Institute for Sustainable Chemistry (ISC), National Institute of Advanced Industrial Science and Technology (AIST), Hiroshima, Japan.
National Institute of Advanced Industrial Science and Technology · JPNational Research Institute of Brewing · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The use of yeasts tolerant to acid (low pH) and salt stress is of industrial importance for several bioproduction processes. To identify new candidate genes having potential roles in low-pH tolerance, we screened an expression genomic DNA library of a multiple-stress-tolerant yeast, Issatchenkia orientalis (Pichia kudriavzevii), for clones that allowed Saccharomyces cerevisiae cells to grow under highly acidic conditions (pH 2.0). A genomic DNA clone containing two putative open reading frames was obtained, of which the putative protein-coding gene comprising 1629 bp was retransformed into the host. This transformant grew significantly at pH 2.0, and at pH 2.5 in the presence of 7.5% Na2SO4. The predicted amino acid sequence of this new gene, named I. orientalis GAS1 (IoGAS1), was 60% identical to the S. cerevisiae Gas1 protein, a glycosylphosphatidylinositol-anchored protein essential for maintaining cell wall integrity, and 58-59% identical to Candida albicans Phr1 and Phr2, pH-responsive proteins implicated in cell wall assembly and virulence. Northern hybridization analyses indicated that, as for the C. albicans homologs, IoGAS1 expression was pH-dependent, with expression increasing with decreasing pH (from 4.0 to 2.0) of the medium. These results suggest that IoGAS1 represents a novel pH-regulated system required for the adaptation of I. orientalis to environments of diverse pH. Heterologous expression of IoGAS1 complemented the growth and morphological defects of a S. cerevisiae gas1Δ mutant, demonstrating that IoGAS1 and the corresponding S. cerevisiae gene play similar roles in cell wall biosynthesis. Site-directed mutagenesis experiments revealed that two conserved glutamate residues (E161 and E262) in the IoGas1 protein play a crucial role in yeast morphogenesis and tolerance to low pH and salt stress. Furthermore, overexpression of IoGAS1 in S. cerevisiae remarkably improved the ethanol fermentation ability at pH 2.5, and at pH 2.0 in the presence of salt (5% Na2SO4), compared to that of a reference strain. Our results strongly suggest that constitutive expression of the IoGAS1 gene in S. cerevisiae could be advantageous for several fermentation processes under these stress conditions.

Indexed as

Gene Expression Regulation, FungalCell WallFungal ProteinsHydrogen-Ion ConcentrationMembrane GlycoproteinsMutagenesis, Site-DirectedPichiaSodium ChlorideStress, PhysiologicalFungal ProteinsMembrane GlycoproteinsSodium Chloride

Identifiers

PMID27589271
PMCPMC5010203
OpenAlexW2507966756

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.