Evidence map›Paper›PMID 27587399›Full record

ArticleThe Journal of biological chemistry2016

Epithelial Expression of Human ABO Blood Group Genes Is Dependent upon a Downstream Regulatory Element Functioning through an Epithelial Cell-specific Transcription Factor, Elf5.

Rie Sano, Tamiko Nakajima, Yoichiro Takahashi, Rieko Kubo, Momoko Kobayashi, Keiko Takahashi, Haruo Takeshita, Kenichi Ogasawara, Yoshihiko Kominato

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Differential expression ofJournal of Taibah University Medical Sciences · 2024
    Article
  3. Article
  4. Review ofTransfusion medicine and hemotherapy : offizielles Organ der Deutschen Gesellschaft fur Transfusionsmedizin und Immunhamatologie · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Molecular Basis of ABO Variants Including Identification of 16 NovelTransfusion medicine and hemotherapy : offizielles Organ der Deutschen Gesellschaft fur Transfusionsmedizin und Immunhamatologie · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Rie SanoFrom the Department of Legal Medicine, Gunma University Graduate School of Medicine, Maebashi, 371-8511 Japan, takagirie@gunma-u.ac.jp.
Tamiko NakajimaFrom the Department of Legal Medicine, Gunma University Graduate School of Medicine, Maebashi, 371-8511 Japan.
Yoichiro TakahashiFrom the Department of Legal Medicine, Gunma University Graduate School of Medicine, Maebashi, 371-8511 Japan.
Rieko KuboFrom the Department of Legal Medicine, Gunma University Graduate School of Medicine, Maebashi, 371-8511 Japan.
Momoko KobayashiFrom the Department of Legal Medicine, Gunma University Graduate School of Medicine, Maebashi, 371-8511 Japan.
Keiko TakahashiFrom the Department of Legal Medicine, Gunma University Graduate School of Medicine, Maebashi, 371-8511 Japan.
Haruo Takeshitathe Department of Legal Medicine, Shimane University School of Medicine, Izumo, Japan, and.
Kenichi Ogasawarathe Japanese Red Cross Central Blood Institute, Tokyo, Japan.
Yoshihiko KominatoFrom the Department of Legal Medicine, Gunma University Graduate School of Medicine, Maebashi, 371-8511 Japan.
Gunma University · JPJapanese Red Cross Society, Japan · JPShimane University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human ABO blood group system is of great importance in blood transfusion and organ transplantation. The ABO system is composed of complex carbohydrate structures that are biosynthesized by A- and B-transferases encoded by the ABO gene. However, the mechanisms regulating ABO gene expression in epithelial cells remain obscure. On the basis of DNase I-hypersensitive sites in and around ABO in epithelial cells, we prepared reporter plasmid constructs including these sites. Subsequent luciferase assays and histone modifications indicated a novel positive regulatory element, designated the +22.6-kb site, downstream from ABO, and this was shown to enhance ABO promoter activity in an epithelial cell-specific manner. Expression of ABO and B-antigen was reduced in gastric cancer KATOIII cells by biallelic deletion of the +22.6-kb site using the CRISPR/Cas9 system. Electrophoretic mobility shift assay and chromatin immunoprecipitation assay demonstrated that the site bound to an epithelial cell-specific transcription factor, Elf5. Mutation of the Ets binding motifs to abrogate binding of this factor reduced the regulatory activity of the +22.6-kb site. Furthermore, ELF5 knockdown with shRNA reduced both endogenous transcription from ABO and B-antigen expression in KATOIII cells. Thus, Elf5 appeared to be involved in the enhancer potential of the +22.6-kb site. These results support the contention that ABO expression is dependent upon a downstream positive regulatory element functioning through a tissue-restricted transcription factor, Elf5, in epithelial cells.

Indexed as

ABO Blood-Group SystemDNA-Binding ProteinsEpitheliumHumansK562 CellsNucleotide MotifsProto-Oncogene Proteins c-etsResponse ElementsTranscription FactorsABO Blood-Group SystemDNA-Binding ProteinsELF5 protein, humanProto-Oncogene Proteins c-etsTranscription FactorsABOCRISPR/CasElf5epithelial cellETS transcription factor familygene regulationtissue-specific transcription factortranscription enhancer

Identifiers

PMID27587399
PMCPMC5077196
OpenAlexW2517117329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.