Evidence map›Paper›PMID 27587225›Full record

ArticleMagnetic resonance imaging2017

On the influence of zero-padding on the nonlinear operations in Quantitative Susceptibility Mapping.

Sarah Eskreis-Winkler, Dong Zhou, Tian Liu, Ajay Gupta, Susan A Gauthier, Yi Wang, Pascal Spincemaille

Abstract read
In one paragraph

Article in Magnetic resonance imaging, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Rapid automated liver quantitative susceptibility mapping.Journal of magnetic resonance imaging : JMRI · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sarah Eskreis-WinklerDepartment of Radiology, Weill Cornell Medicine, 525 East 70th Street, New York, NY, USA.
Dong ZhouDepartment of Radiology, Weill Cornell Medicine, 525 East 70th Street, New York, NY, USA.
Tian LiuMedimagemetric, LLC, 445 Main St, #7H, New York, NY, USA.
Ajay GuptaDepartment of Radiology, Weill Cornell Medicine, 525 East 70th Street, New York, NY, USA.
Susan A GauthierDepartment of Neurology, Weill Cornell Medicine, 525 East 68th Street, PO Box 117, New York, NY, USA.
Yi WangDepartment of Radiology, Weill Cornell Medicine, 525 East 70th Street, New York, NY, USA.
Pascal SpincemailleDepartment of Radiology, Weill Cornell Medicine, 525 East 70th Street, New York, NY, USA. Electronic address: pas2018@med.cornell.edu.

Funding

3.0T Magnetic Resonance Imaging System for Preclinical, Translational and Clinical ResearchS10OD021782 · OD · WEILL MEDICAL COLL OF CORNELL UNIV · PI WANG, YI · 2016 to 2016
$2.0M
Compact Representations of Dynamic Liver MRIR01CA181566 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI SPINCEMAILLE, PASCAL · 2015 to 2019
$1.9M
MRI method for quantitatively mapping cerebral microbleedsR01NS072370 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI WANG, YI · 2011 to 2015
$1.8M
Analyses of gradient echo MRI dataR01EB013443 · NIBIB · WEILL MEDICAL COLL OF CORNELL UNIV · PI WANG, YI · 2011 to 2014
$1.5M
NCI NIH HHS R01 CA181566NIBIB NIH HHS R01 EB013443NIH HHS S10 OD021782NINDS NIH HHS R01 NS072370
6 · The paper itself

Abstract

purposeZero padding is a well-studied interpolation technique that improves image visualization without increasing image resolution. This interpolation is often performed as a last step before images are displayed on clinical workstations. Here, we seek to demonstrate the importance of zero padding before rather than after performing non-linear post-processing algorithms, such as Quantitative Susceptibility Mapping (QSM). To do so, we evaluate apparent spatial resolution, relative error and depiction of multiple sclerosis (MS) lesions on images that were zero padded prior to, in the middle of, and after the application of the QSM algorithm. MATERIALS AND

methodsHigh resolution gradient echo (GRE) data were acquired on twenty MS patients, from which low resolution data were derived using k-space cropping. Pre-, mid-, and post-zero padded QSM images were reconstructed from these low resolution data by zero padding prior to field mapping, after field mapping, and after susceptibility mapping, respectively. Using high resolution QSM as the gold standard, apparent spatial resolution, relative error, and image quality of the pre-, mid-, and post-zero padded QSM images were measured and compared.

resultsBoth the accuracy and apparent spatial resolution of the pre-zero padded QSM was higher than that of mid-zero padded QSM (p<0.001; p<0.001), which was higher than that of post-zero padded QSM (p<0.001; p<0.001). The image quality of pre-zero padded reconstructions was higher than that of mid- and post-zero padded reconstructions (p=0.004; p<0.001).

conclusionZero padding of the complex GRE data prior to nonlinear susceptibility mapping improves image accuracy and apparent resolution compared to zero padding afterwards. It also provides better delineation of MS lesion geometry, which may improve lesion subclassification and disease monitoring in MS patients.

Indexed as

AlgorithmsAdultAgedBrainEvaluation Studies as TopicFemaleHumansImage Interpretation, Computer-AssistedImage Processing, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedMultiple SclerosisReproducibility of ResultsRetrospective StudiesMicrostructureMultiple sclerosisNonlinearityQuantitative susceptibility mapping (QSM)Zero padding

Identifiers

PMID27587225
PMCPMC5160043

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.