Evidence map›Paper›PMID 27583126›Full record

ArticleEvoDevo2016

Fibronectin contributes to notochord intercalation in the invertebrate chordate, Ciona intestinalis.

Fernando Segade, Christina Cota, Amber Famiglietti, Anna Cha, Brad Davidson

Open access · goldAbstract read
In one paragraph

Article in EvoDevo, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. The AscidiaFrontiers in cell and developmental biology · 2021
    Article
  7. Review
  8. Review
  9. CRISPR Knockouts in Ciona Embryos.Advances in experimental medicine and biology · 2018
    Review
  10. Functional and evolutionary insights from theDevelopment (Cambridge, England) · 2017
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Fernando SegadeDepartment of Anatomy and Cell Biology, University of Pennsylvania School of Dental Medicine, Philadelphia, PA 19104 USA.
Christina CotaDepartment of Biology, Swarthmore College, 500 College Ave., Swarthmore, PA 19081 USA.
Amber FamigliettiSection on Biological Chemistry, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, MD 20892 USA.
Anna ChaDepartment of Systems Biology, Harvard Medical School, Boston, MA USA.
Brad DavidsonDepartment of Biology, Swarthmore College, 500 College Ave., Swarthmore, PA 19081 USA.ORCID 0000-0001-5082-7872
Swarthmore College · USHarvard University · USNational Institutes of Health · USUniversity of Pennsylvania · US

Funding

Signaling pathways in early heart developmentR01HL091027 · NHLBI · UNIVERSITY OF ARIZONA · PI DAVIDSON, BRADLEY J · 2008 to 2012
$1.9M
Chordate heart gene networksR15HD080525 · NICHD · SWARTHMORE COLLEGE · PI DAVIDSON, BRADLEY J · 2014 to 2014
$421k
NHLBI NIH HHS R01 HL091027NICHD NIH HHS R15 HD080525
6 · The paper itself

Abstract

backgroundGenomic analysis has upended chordate phylogeny, placing the tunicates as the sister group to the vertebrates. This taxonomic rearrangement raises questions about the emergence of a tunicate/vertebrate ancestor.

resultsCharacterization of developmental genes uniquely shared by tunicates and vertebrates is one promising approach for deciphering developmental shifts underlying acquisition of novel, ancestral traits. The matrix glycoprotein Fibronectin (FN) has long been considered a vertebrate-specific gene, playing a major instructive role in vertebrate embryonic development. However, the recent computational prediction of an orthologous "vertebrate-like" Fn gene in the genome of a tunicate, Ciona savignyi, challenges this viewpoint suggesting that Fn may have arisen in the shared tunicate/vertebrate ancestor. Here we verify the presence of a tunicate Fn ortholog. Transgenic reporter analysis was used to characterize a Ciona Fn enhancer driving expression in the notochord. Targeted knockdown in the notochord lineage indicates that FN is required for proper convergent extension.

conclusionsThese findings suggest that acquisition of Fn was associated with altered notochord morphogenesis in the vertebrate/tunicate ancestor.

Indexed as

Chordate evolutionConvergent extensionExtracellular matrixFibronectinNotochordTunicates

Identifiers

PMID27583126
PMCPMC5006582
OpenAlexW2517949611

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.