ArticleFrontiers in plant science2016
Genome-Wide Association Study of Resistance to Soybean Cyst Nematode (Heterodera glycines) HG Type 2.5.7 in Wild Soybean (Glycine soja).
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.
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47 citing papers in PubMed, 85 citations in OpenAlex.
- Genome-wide association study of soybean germplasm derived from modern Canadian and Chinese soybean cultivars to identify novel genes conferring soybean cyst nematode resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Identification of candidate genes associated with resistance to Heterodera sojae in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Soybean Synergies: A Comprehensive Review on Novel Extraction Techniques and Their Role in Unlocking Health Potential.Food science & nutrition · 2025Review
- Genome-wide association study and molecular marker development for resistance to soybean cyst nematode in soybean.The plant genome · 2025Article
- Mainstreaming3 Biotech · 2025Review
- Soybean genome‑wide association study of seed weight, protein, and oil content in the southeastern USA.Molecular genetics and genomics : MGG · 2025Article
- Genome-Wide Association Study and Genomic Prediction of Soybean Mosaic Virus Resistance.International journal of molecular sciences · 2025Article
- Genome and GWAS analyses for soybean cyst nematode resistance in USDA world-wide common bean (Frontiers in plant science · 2025Article
- Genome-wide association analysis and genomic prediction of salt tolerance trait in soybean germplasm.Frontiers in plant science · 2024Article
- Deciphering genetic factors contributing to enhanced resistance against Cercospora leaf blight in soybean (Frontiers in genetics · 2024Article
- Cataloging SCN resistance loci in North American public soybean breeding programs.Frontiers in plant science · 2023Article
- Genome-wide association study of powdery mildew resistance in cultivated soybean from Northeast China.Frontiers in plant science · 2023Article
- Genome-Wide Association Studies Reveal Novel Loci for Herbivore Resistance in Wild Soybean (International journal of molecular sciences · 2022Article
- Review
- Development of a versatile resource for post-genomic research through consolidating and characterizing 1500 diverse wild and cultivated soybean genomes.BMC genomics · 2022Article
- Detection of rare nematode resistance Rhg1 haplotypes in Glycine soja and a novel Rhg1 α-SNAP.The plant genome · 2022Article
- A Broad Review of Soybean Research on the Ongoing Race to Overcome Soybean Cyst Nematode.Biology · 2022Review
- Genome-Wide Association Analysis and Gene Mining of Resistance to China Race 1 of Frogeye Leaf Spot in Soybean.Frontiers in plant science · 2022Article
- Functional analysis of soybean cyst nematode-inducible synthetic promoters and their regulation by biotic and abiotic stimuli in transgenic soybean (Frontiers in plant science · 2022Article
- Evaluation of perennialJournal of nematology · 2022Article
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Authors and funding
7 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Soybean cyst nematode (SCN) is the most destructive soybean pest worldwide. Host plant resistance is the most environmentally friendly and cost-effective way of mitigating SCN damage to soybeans. However, overuse of the resistant soybean [Glycine max (L.) Merr.] cultivars from limited genetic resources has resulted in SCN race shifts in many soybean-growing areas. Thus, exploration of novel sources of SCN resistance and dissection of the genetic basis are urgently needed. In this study, we screened 235 wild soybean (Glycine soja Sieb. & Zucc.) accessions to identify genotypes resistant to SCN HG Type 2.5.7 (race 5), a less investigated type but is prevalent in the southeastern US. We also dissected the genetic basis of SCN resistance using a genome-wide association study with SNPs genotyped by SoySNP50k iSelect BeadChip. In total, 43 resistant accessions (female index < 30) were identified, with 10 SNPs being significantly associated with SCN HG 2.5.7 resistance in this wild species. Furthermore, four significant SNPs were localized to linked regions of the known quantitative trait locus (QTL) rhg1 on chromosome 18. The other four SNPs on chromosome 18 and two SNPs on chromosome 19 are novel. Genes encoding disease resistance-related proteins with a leucine-rich region, a mitogen-activated protein kinase (MAPK) on chromosome 18, and a MYB transcription factor on chromosome 19 were identified as promising candidate genes. The identified SNPs and candidate genes will benefit future marker-assisted breeding and dissection of the molecular mechanisms underlying the soybean-SCN interaction.
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