Evidence map›Paper›PMID 27582469›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Parent-of-origin effects of A1CF and AGO2 on testicular germ-cell tumors, testicular abnormalities, and fertilization bias.

Delphine Carouge, Valerie Blanc, Sue E Knoblaugh, Robert J Hunter, Nicholas O Davidson, Joseph H Nadeau

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Genetic control of non-genetic inheritance in mammals: state-of-the-art and perspectives.Mammalian genome : official journal of the International Mammalian Genome Society · 2020
    Review
  8. Article
  9. Article
  10. Testicular germ cell tumor: a comprehensive review.Cellular and molecular life sciences : CMLS · 2019
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. APOBEC-1 Complementation Factor: From RNA Binding to Cancer.Cancer control : journal of the Moffitt Cancer Center
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Delphine CarougePacific Northwest Research Institute, Seattle, WA 98122;
Valerie BlancDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110;
Sue E KnoblaughDepartment of Veterinary Biosciences, The Ohio State University, Columbus, OH 43210;
Robert J HunterPreclinical Research and Transgenic Services, University of Washington, Seattle, WA 98195.
Nicholas O DavidsonDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110;
Joseph H NadeauPacific Northwest Research Institute, Seattle, WA 98122; jnadeau@pnri.org.
Pacific Northwest Diabetes Research Institute · USWashington University in St. Louis · USThe Ohio State University · USUniversity of Washington · US

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
HEPATIC SYNTHESIS AND SECRETION OF APOLIPOPROTEIN (A)R01DK056260 · NIDDK · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 1999 to 2017
$5.9M
GENETIC CONTROL OF SUSCEPTIBILITY TO TESTICULAR CANCERR01CA075056 · NCI · PACIFIC NORTHWEST RESEARCH INSTITUTE · PI NADEAU, JOSEPH H. · 1998 to 2014
$5.7M
ENTEROHEPATIC LIPID FLUX AND APOPROTEIN BIOSYNTHESIS.R37HL038180 · NHLBI · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 2000 to 2009
$5.1M
ENTEROHEPATIC LIPID FLUX AND APOPROTEIN BIOSYNTHESISR01HL038180 · NHLBI · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 1986 to 2018
$3.8M
Lamarck Redux: Transgenerational genetic effects on phenotypes and diseaseDP1HD075624 · NICHD · PACIFIC NORTHWEST RESEARCH INSTITUTE · PI NADEAU, JOSEPH H. · 2012 to 2014
$2.6M
NCI NIH HHS R01 CA075056NHLBI NIH HHS R01 HL038180NHLBI NIH HHS R37 HL038180NICHD NIH HHS DP1 HD075624NIDDK NIH HHS P30 DK052574NIDDK NIH HHS R01 DK056260
6 · The paper itself

Abstract

Testicular tumors, the most common cancer in young men, arise from abnormalities in germ cells during fetal development. Unconventional inheritance for testicular germ cell tumor (TGCT) risk both in humans and mice implicates epigenetic mechanisms. Apolipoprotein B mRNA-editing enzyme complex 1 (APOBEC1) cytidine deaminase and Deadend-1, which are involved in C-to-U RNA editing and microRNA-dependent mRNA silencing, respectively, are potent epigenetic modifiers of TGCT susceptibility in the genetically predisposed 129/Sv inbred mouse strain. Here, we show that partial loss of either APOBEC1 complementation factor (A1CF), the RNA-binding cofactor of APOBEC1 in RNA editing, or Argonaute 2 (AGO2), a key factor in the biogenesis of certain noncoding RNAs, modulates risk for TGCTs and testicular abnormalities in both parent-of-origin and conventional genetic manners. In addition, non-Mendelian inheritance was found among progeny of A1cf and Ago2 mutant intercrosses but not in backcrosses and without fetal loss. Together these findings suggest nonrandom union of gametes rather than meiotic drive or preferential lethality. Finally, this survey also suggested that A1CF contributes to long-term reproductive performance. These results directly implicate the RNA-binding proteins A1CF and AGO2 in the epigenetic control of germ-cell fate, urogenital development, and gamete functions.

Indexed as

AnimalsAPOBEC-1 DeaminaseArgonaute ProteinsDisease Models, AnimalEpigenesis, GeneticGenetic Predisposition to DiseaseGerm CellsHumansMaleMeiosisMiceMicroRNAsNeoplasms, Germ Cell and EmbryonalRNA-Binding ProteinsRNA EditingTesticular NeoplasmsA1CF protein, humanAgo2 protein, mouseAPOBEC-1 DeaminaseArgonaute ProteinsMicroRNAsRNA-Binding ProteinsA1CFAGO2epigenetic inheritanceparent-of-origin effectstesticular cancer

Identifiers

PMID27582469
PMCPMC5027451
OpenAlexW2513890928

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.