Evidence map›Paper›PMID 27582319›Full record

ArticleBMC evolutionary biology2016

The evolutionally-conserved function of group B1 Sox family members confers the unique role of Sox2 in mouse ES cells.

Hitoshi Niwa, Akira Nakamura, Makoto Urata, Maki Shirae-Kurabayashi, Shigehiro Kuraku, Steven Russell, Satoshi Ohtsuka

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  5. The Role of SOX Transcription Factors in Ageing and Age-Related Diseases.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Article
  8. Yamanaka Factors in the Budding TunicateFrontiers in cell and developmental biology · 2022
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Distinct transcriptional programs of SOX2 in different types of small cell lung cancers.Laboratory investigation; a journal of technical methods and pathology · 2020
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Hitoshi NiwaLaboratory for Pluripotent Stem Cell Studies, RIKEN Center for Developmental Biology (CDB), 2-2-3 Minatojima-minamimachi, Chuo-ku, Kobe, 650-0047, Japan. niwa@kumamoto-u.ac.jp.ORCID 0000-0002-5280-8031
Akira NakamuraDepartment of Germline Development, Institute of Molecular Embryology and Genetics, Kumamoto University, 2-2-1 Honjo, Chuo-ku, Kumamoto, 860-0811, Japan.
Makoto UrataNoto Marine Laboratory, Institute of Nature and Environmental Technology, Kanazawa University, Ogi 34-11, Noto-cho, Hohsu, Ishikawa, 927-0553, Japan.
Maki Shirae-KurabayashiSugashima Marine Biological Laboratory, Graduate School of Science, Nagoya University, Sugashima-cho 429-63, Toba C, Mie, 517-0004, Japan.
Shigehiro KurakuPhyloinformatics Unit, RIKEN Center for Life Science Technologies (CLST), 2-2-3 Minatojima-minamimachi, Chuo-ku, Kobe, 650-0047, Japan.
Steven RussellDepartment of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK.
Satoshi OhtsukaLaboratory for Pluripotent Stem Cell Studies, RIKEN Center for Developmental Biology (CDB), 2-2-3 Minatojima-minamimachi, Chuo-ku, Kobe, 650-0047, Japan.
Kanazawa Medical University · JPKanazawa University · JPKumamoto University · JPNagoya University · JPRIKEN Center for Biosystems Dynamics Research · JPUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L002817/1
6 · The paper itself

Abstract

backgroundIn mouse ES cells, the function of Sox2 is essential for the maintenance of pluripotency. Since the Sox-family of transcription factors are well conserved in the animal kingdom, addressing the evolutionary origin of Sox2 function in pluripotent stem cells is intriguing from the perspective of understanding the origin of pluripotency.

resultsHere we approach this question using a functional complementation assay in inducible Sox2-null ES cells. Assaying mouse Sox proteins from different Groups, we found that only Group B1 and Group G proteins were able to support pluripotency. Interestingly, invertebrate homologs of mammalian Group B1 Sox proteins were able to replace the pluripotency-associated function of mouse Sox2. Moreover, the mouse ES cells rescued by the Drosophila SoxNeuro protein are able to contribute to chimeric embryos.

conclusionsThese data indicate that the function of mouse Sox2 supporting pluripotency is based on an evolutionally conserved activity of the Group B1 Sox family. Since pluripotent stem cell population in developmental process could be regarded as the evolutional novelty in vertebrates, it could be regarded as a co-optional use of their evolutionally conserved function.

Indexed as

Evolution, MolecularAnimalsDrosophilaDrosophila ProteinsEmbryonic Stem CellsFemaleMiceMice, Inbred C57BLMice, Inbred ICRPluripotent Stem CellsSOXB1 Transcription FactorsSOX Transcription FactorsDrosophila ProteinsSox2 protein, mouseSOXB1 Transcription FactorsSoxN protein, DrosophilaSOX Transcription FactorsCo-optionEvolutionPluripotent stem cellsSox2

Identifiers

PMID27582319
PMCPMC5007870
OpenAlexW2508648364

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.