Evidence map›Paper›PMID 27582092›Full record

ArticleMolecular oncology2016

Spatial and temporal clonal evolution during development of metastatic urothelial carcinoma.

Mathilde B H Thomsen, Iver Nordentoft, Philippe Lamy, Søren Høyer, Søren Vang, Jakob Hedegaard, Michael Borre, Jørgen B Jensen, Torben F Ørntoft, Lars Dyrskjøt

Abstract read
In one paragraph

Article in Molecular oncology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. DNMT3A/Cancers · 2022
    Article
  10. Article
  11. Article
  12. Molecular Pathology of Urothelial Carcinoma.Surgical pathology clinics · 2021
    Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Discordant molecular subtype classification in the basal-squamous subtype of bladder tumors and matched lymph-node metastases.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2018
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mathilde B H ThomsenDepartment of Molecular Medicine, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Iver NordentoftDepartment of Molecular Medicine, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Philippe LamyDepartment of Molecular Medicine, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Søren HøyerDepartment of Pathology, Aarhus University Hospital, 8000 Aarhus C, Denmark.
Søren VangDepartment of Molecular Medicine, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Jakob HedegaardDepartment of Molecular Medicine, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Michael BorreDepartment of Urology, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Jørgen B JensenDepartment of Urology, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Torben F ØrntoftDepartment of Molecular Medicine, Aarhus University Hospital, 8200 Aarhus N, Denmark.
Lars DyrskjøtDepartment of Molecular Medicine, Aarhus University Hospital, 8200 Aarhus N, Denmark. Electronic address: lars@clin.au.dk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Patients with metastatic bladder cancer have a median survival of only 13-14 months. Precision medicine using targeted therapy may improve survival. Here we investigated spatial and temporal tumour evolution and tumour heterogeneity in order to evaluate the potential use of targeted treatment of metastatic bladder cancer. We performed a proof-of-concept study by whole exome sequencing of multiple tumour regions (n = 22) from three patients with metastatic bladder cancer. DNA from primary and metastatic tumour biopsies was analysed for mutations using Mutect and potential therapeutic targets were identified. We identified 256, 265 and 378 somatic mutations per patient, encompassing mutations with an estimated functional impact in 6-12 known disease driver genes per patient. Disease driver mutations present in all tumour regions could be identified in all cases, however, over time metastasis specific driver mutations emerged. For each patient we identified 6-10 potentially therapeutic targets, however very few targets were present in all regions. Low mutational allele frequencies were observed in most regions suggesting a complex mixture of different cancer cells with no spatial demarcation of subclones. In conclusion, primary bladder tumours and metastatic lesions showed heterogeneity at the molecular level, but within the primary tumour the heterogeneity appeared low. The observed lack of potential therapeutic targets common to all cancer cells in primary tumours and metastases emphasizes the challenges in designing rational targeted therapy solely based on analysis of the primary tumours.

Indexed as

APOBEC DeaminasesClonal EvolutionDisease ProgressionGene FrequencyHumansModels, BiologicalMutagenesisMutationNeoplasm MetastasisPhylogenySequence Analysis, DNATime FactorsUrinary Bladder NeoplasmsUrotheliumAPOBEC DeaminasesBladder cancerClonal evolutionIntra tumour heterogeneityMetastasisTargeted therapyWhole exome sequencing

Identifiers

PMID27582092
PMCPMC5423216

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.