Evidence map›Paper›PMID 27581440›Full record

ArticleJournal of industrial microbiology & biotechnology2016

Carboxyl-terminal domain characterization of polyene-specific P450 hydroxylase in Pseudonocardia autotrophica.

Min-Kyung Kim, Hyung-Jin Won, Hye-Jin Kim, Si-Sun Choi, Heung-Shick Lee, Pil Kim, Eung-Soo Kim

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Article in Journal of industrial microbiology & biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Min-Kyung KimDepartment of Biological Engineering, Inha University, Incheon, 402-751, Korea.
Hyung-Jin WonDepartment of Biological Engineering, Inha University, Incheon, 402-751, Korea.
Hye-Jin KimDepartment of Biological Engineering, Inha University, Incheon, 402-751, Korea.
Si-Sun ChoiDepartment of Biological Engineering, Inha University, Incheon, 402-751, Korea.
Heung-Shick LeeDepartment of Biotechnology and Bioinformatics, Korea University, Chungnam, 339-700, Korea.
Pil KimDivision of Biotechnology, The Catholic University of Korea, Kyungki, 420-743, Korea.
Eung-Soo KimDepartment of Biological Engineering, Inha University, Incheon, 402-751, Korea. eungsoo@inha.ac.kr.
Inha University · KRCatholic University of Korea · KRKorea University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A polyene compound NPP identified in Pseudonocardia autotrophica was shown to contain an aglycone identical to nystatin, but to harbor a unique disaccharide moiety that led to higher solubility and reduced hemolytic activity. Recently, it was revealed that the final step of NPP (nystatin-like polyene) biosynthesis is C10 regio-specific hydroxylation by the cytochrome P450 hydroxylase (CYP) NppL (Kim et al. [7]). Through mutation and cross-complementation, here we found that NppL preferred a polyene substrate containing a disaccharide moiety for C10 hydroxylation, while its orthologue NysL involved in nystatin biosynthesis showed no substrate preference toward mono- and disaccharide moieties, suggesting that two homologous polyene CYPs, NppL and NysL might possess a unique domain recognizing a sugar moiety. Two hybrid NppL constructs containing the C-terminal domain of NysL exhibited no substrate preference toward 10-deoxy NPP and 10-deoxy nystatin-like NysL, implying that the C-terminal domain plays a major role in differentiating the sugar moiety responsible for substrate specificity. Further C-terminal domain dissection of NppL revealed that the last fifty amino acids play a critical role in determining substrate specificity of polyene-specific hydroxylation, setting the stage for the biotechnological application of hydroxyl diversification for novel polyene biosynthesis in actinomycetes.

Indexed as

ActinomycetalesBacterial ProteinsCytochrome P-450 Enzyme SystemDisaccharidesHydroxylationNystatinPolyenesProtein DomainsSubstrate SpecificityBacterial ProteinsCytochrome P-450 Enzyme SystemDisaccharidesNystatinPolyenesP450 hydroxylasePolyenePseudonocardiaSubstrate specificity

Identifiers

PMID27581440
OpenAlexW2510626918

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.