Evidence map›Paper›PMID 27580923›Full record

ArticleDatabase : the journal of biological databases and curation2016

Skeleton Genetics: a comprehensive database for genes and mutations related to genetic skeletal disorders.

Chong Chen, Yi Jiang, Chenyang Xu, Xinting Liu, Lin Hu, Yanbao Xiang, Qingshuang Chen, Denghui Chen, Huanzheng Li, Xueqin Xu and 1 more

Open access · goldAbstract readDataset
In one paragraph

Article in Database : the journal of biological databases and curation, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  3. A homozygousJBMR plus · 2024
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  5. Case Report: Recurrent Variant c.298 TA inFrontiers in genetics · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Cold Spring Harbor molecular case studies · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Chong ChenDepartment of Genetics of Dingli Clinical Medical School, Wenzhou Central Hospital, Wenzhou 325000, China.
Yi JiangInstitute of Genomic Medicine, Wenzhou Medical University, Wenzhou 325035, China.
Chenyang XuDepartment of Genetics of Dingli Clinical Medical School, Wenzhou Central Hospital, Wenzhou 325000, China.
Xinting LiuInstitute of Genomic Medicine, Wenzhou Medical University, Wenzhou 325035, China.
Lin HuSchool of Laboratory Medicine and Life Science, Wenzhou Medical University, Wenzhou 325035, China.
Yanbao XiangDepartment of Genetics of Dingli Clinical Medical School, Wenzhou Central Hospital, Wenzhou 325000, China.
Qingshuang ChenDepartment of Genetics of Dingli Clinical Medical School, Wenzhou Central Hospital, Wenzhou 325000, China.
Denghui ChenInstitute of Genomic Medicine, Wenzhou Medical University, Wenzhou 325035, China.
Huanzheng LiDepartment of Genetics of Dingli Clinical Medical School, Wenzhou Central Hospital, Wenzhou 325000, China.
Xueqin XuDepartment of Genetics of Dingli Clinical Medical School, Wenzhou Central Hospital, Wenzhou 325000, China.
Shaohua TangDepartment of Genetics of Dingli Clinical Medical School, Wenzhou Central Hospital, Wenzhou 325000, China School of Laboratory Medicine and Life Science, Wenzhou Medical University, Wenzhou 325035, China tsh006@126.com.
Wenzhou Central Hospital · CNWenzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic skeletal disorders (GSD) involving the skeletal system arises through disturbances in the complex processes of skeletal development, growth and homeostasis and remain a diagnostic challenge because of their clinical heterogeneity and genetic variety. Over the past decades, tremendous effort platforms have been made to explore the complex heterogeneity, and massive new genes and mutations have been identified in different GSD, but the information supplied by literature is still limited and it is hard to meet the further needs of scientists and clinicians. In this study, combined with Nosology and Classification of genetic skeletal disorders, we developed the first comprehensive and annotated genetic skeletal disorders database, named 'SkeletonGenetics', which contains information about all GSD-related knowledge including 8225 mutations in 357 genes, with detailed information associated with 481 clinical diseases (2260 clinical phenotype) classified in 42 groups defined by molecular, biochemical and/or radiographic criteria from 1698 publications. Further annotations were performed to each entry including Gene Ontology, pathways analysis, protein-protein interaction, mutation annotations, disease-disease clustering and gene-disease networking. Furthermore, using concise search methods, intuitive graphical displays, convenient browsing functions and constantly updatable features, 'SkeletonGenetics' could serve as a central and integrative database for unveiling the genetic and pathways pre-dispositions of GSD.Database URL: http://101.200.211.232/skeletongenetics/.

Indexed as

Databases, GeneticGene OntologyMutationAnimalsBone DiseasesHumansMolecular Sequence Annotation

Identifiers

PMID27580923
PMCPMC5006089
OpenAlexW2514189710

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.