Evidence map›Paper›PMID 27580619›Full record

ArticlePlanta2017

Molecular characterization and evolution of carnivorous sundew (Drosera rotundifolia L.) class V β-1,3-glucanase.

Jaroslav Michalko, Tanya Renner, Patrik Mészáros, Peter Socha, Jana Moravčíková, Alžbeta Blehová, Jana Libantová, Zuzana Polóniová, Ildikó Matušíková

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Article in Planta, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Jaroslav MichalkoInstitute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Akademická 2, P.O. Box 39A, 950 07, Nitra, Slovak Republic.
Tanya RennerDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182-4614, USA.
Patrik MészárosDepartment of Botany and Genetics, Faculty of Natural Sciences, Constantine the Philosopher University, Nábrežie mládeže 91, 949 74, Nitra, Slovak Republic.
Peter SochaInstitute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Akademická 2, P.O. Box 39A, 950 07, Nitra, Slovak Republic.
Jana MoravčíkováInstitute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Akademická 2, P.O. Box 39A, 950 07, Nitra, Slovak Republic.
Alžbeta BlehováDepartment of Plant Physiology, Faculty of Natural Sciences, Comenius University, Mlynská dolina B2, 842 15, Bratislava, Slovak Republic.
Jana LibantováInstitute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Akademická 2, P.O. Box 39A, 950 07, Nitra, Slovak Republic.
Zuzana PolóniováInstitute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Akademická 2, P.O. Box 39A, 950 07, Nitra, Slovak Republic.
Ildikó MatušíkováInstitute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, Akademická 2, P.O. Box 39A, 950 07, Nitra, Slovak Republic. ildiko.matusikova@ucm.sk.
Slovak Academy of Sciences · SKComenius University Bratislava · SKConstantine the Philosopher University in Nitra · SKInstitute of Plant Genetics and Biotechnology of the Slovak Academy of Sciences · SKSan Diego State University · USUniversity of Ss. Cyril and Methodius in Trnava · SK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionA gene for β-1,3-glucanase was isolated from carnivorous sundew. It is active in leaves and roots, but not in digestive glands. Analyses in transgenic tobacco suggest its function in germination. Ancestral plant β-1,3-glucanases (EC 3.2.1.39) played a role in cell division and cell wall remodelling, but divergent evolution has extended their roles in plant defense against stresses to decomposition of prey in carnivorous plants. As available gene sequences from carnivorous plants are rare, we isolated a glucanase gene from roundleaf sundew (Drosera rotundifolia L.) by a genome walking approach. Computational predictions recognized typical gene features and protein motifs described for other plant β-1,3-glucanases. Phylogenetic reconstructions suggest strong support for evolutionary relatedness to class V β-1,3-glucanases, including homologs that are active in the traps of related carnivorous species. The gene is expressed in sundew vegetative tissues but not in flowers and digestive glands, and encodes for a functional enzyme when expressed in transgenic tobacco. Detailed analyses of the supposed promoter both in silico and in transgenic tobacco suggest that this glucanase plays a role in development. Specific spatiotemporal activity was observed during transgenic seed germination. Later during growth, the sundew promoter was active in marginal and sub-marginal areas of apical true leaf meristems of young tobacco plants. These results suggest that the isolated glucanase gene is regulated endogenously, possibly by auxin. This is the first report on a nuclear gene study from sundew.

Indexed as

Evolution, MolecularAmino Acid SequenceComputer SimulationDroseraGenes, PlantGlucan 1,3-beta-GlucosidaseGlucuronidaseNicotianaNucleotide MotifsPhylogenyPlants, Genetically ModifiedPromoter Regions, GeneticSequence AlignmentStress, PhysiologicalTranscription FactorsGlucan 1,3-beta-GlucosidaseGlucuronidaseTranscription FactorsCotyledonsEmbryo hypocotylsGlucanhydrolasePR proteins

Identifiers

PMID27580619
OpenAlexW2517841381

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.