Evidence map›Paper›PMID 27580202›Full record

ArticleActa crystallographica. Section A, Foundations and advances2016

Improving the efficiency of molecular replacement by utilizing a new iterative transform phasing algorithm.

Hongxing He, Hengrui Fang, Mitchell D Miller, George N Phillips, Wu Pei Su

Abstract read
In one paragraph

Article in Acta crystallographica. Section A, Foundations and advances, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hongxing HeDepartment of Physics and Texas Center for Superconductivity, University of Houston, Houston, Texas 77204, USA.
Hengrui FangDepartment of Physics and Texas Center for Superconductivity, University of Houston, Houston, Texas 77204, USA.
Mitchell D MillerDepartment of BioSciences, Rice University, Houston, Texas 77005, USA.
George N PhillipsDepartment of BioSciences, Rice University, Houston, Texas 77005, USA.
Wu Pei SuDepartment of Physics and Texas Center for Superconductivity, University of Houston, Houston, Texas 77204, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An iterative transform method proposed previously for direct phasing of high-solvent-content protein crystals is employed for enhancing the molecular-replacement (MR) algorithm in protein crystallography. Target structures that are resistant to conventional MR due to insufficient similarity between the template and target structures might be tractable with this modified phasing method. Trial calculations involving three different structures are described to test and illustrate the methodology. The relationship of the approach to PHENIX Phaser-MR and MR-Rosetta is discussed.

Indexed as

ab initio phasinghybrid input–output algorithmmolecular replacementprotein crystallography

Identifiers

PMID27580202
PMCPMC5006650

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.