Evidence map›Paper›PMID 27580029›Full record

ArticleNature2016

Fumarate is an epigenetic modifier that elicits epithelial-to-mesenchymal transition.

Marco Sciacovelli, Emanuel Gonçalves, Timothy Isaac Johnson, Vincent Roberto Zecchini, Ana Sofia Henriques da Costa, Edoardo Gaude, Alizee Vercauteren Drubbel, Sebastian Julian Theobald, Sandra Riekje Abbo, Maxine Gia Binh Tran and 14 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 368 papers.

0numbers the graph read from it
0cells of the map it votes in
368citing papers in PubMed
48.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

368 citing papers in PubMed, 568 citations in OpenAlex.

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308 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 7 institutions in 2 countries.

Marco SciacovelliMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Emanuel GonçalvesEuropean Molecular Biology Laboratory (EMBL), European Bioinformatics Institute (EBI), Cambridge CB10 1SD, UK.
Timothy Isaac JohnsonMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Vincent Roberto ZecchiniMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Ana Sofia Henriques da CostaMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Edoardo GaudeMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Alizee Vercauteren DrubbelMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Sebastian Julian TheobaldMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Sandra Riekje AbboMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
Maxine Gia Binh TranDepartment of Oncology, Uro-Oncology Research Group, University of Cambridge, Cambridge CB2 0Ql, UK.
Vinothini RajeeveIntegrative Cell Signalling and Proteomics, Centre for Haemato-Oncology, John Vane Science Centre, Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London EC1M 6BQ, UK.
Simone CardaciCancer Research UK Beatson Institute, Glasgow G61 1BD, UK.
Sarah FosterDepartment of Physiology, Development and Neuroscience, University of Cambridge, Cambridge CB2 3DY, UK.
Haiyang YunDepartment of Haematology, Cambridge Institute for Medical Research and Addenbrooke's Hospital, and Wellcome Trust-Medical Research Council Cambridge Stem Cell Institute, University of Cambridge, Cambridge CB2 0XY, UK.
Pedro CutillasIntegrative Cell Signalling and Proteomics, Centre for Haemato-Oncology, John Vane Science Centre, Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London EC1M 6BQ, UK.
Anne WarrenDepartment of Pathology, University of Cambridge, Cambridge CB2 0QQ, UK.
Vincent GnanapragasamAcademic Urology Group, Department of Surgery, University of Cambridge, Cambridge CB2 0QQ, UK.
Eyal GottliebCancer Research UK Beatson Institute, Glasgow G61 1BD, UK.
Kristian FranzeDepartment of Physiology, Development and Neuroscience, University of Cambridge, Cambridge CB2 3DY, UK.
Brian HuntlyDepartment of Haematology, Cambridge Institute for Medical Research and Addenbrooke's Hospital, and Wellcome Trust-Medical Research Council Cambridge Stem Cell Institute, University of Cambridge, Cambridge CB2 0XY, UK.
Eamonn Richard MaherDepartment of Medical Genetics, University of Cambridge, Cambridge CB2 0QQ, UK.
Patrick Henry MaxwellCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, UK.
Julio Saez-RodriguezEuropean Molecular Biology Laboratory (EMBL), European Bioinformatics Institute (EBI), Cambridge CB10 1SD, UK.
Christian FrezzaMedical Research Council Cancer Unit, University of Cambridge, Cambridge CB2 0XZ, UK.
University of Cambridge · GBMedical Research Council · GBCancer Research UK Scotland Institute · GBEuropean Bioinformatics Institute · GBQueen Mary University of London · GBAddenbrooke's Hospital · GBNIHR Cambridge Biomedical Research Centre

Funding

Cancer Research UK 18278Medical Research Council G1100312Medical Research Council MC_PC_12009Medical Research Council MC_UU_12022/6Medical Research Council MR/M010392/1
6 · The paper itself

Abstract

Mutations of the tricarboxylic acid cycle enzyme fumarate hydratase cause hereditary leiomyomatosis and renal cell cancer. Fumarate hydratase-deficient renal cancers are highly aggressive and metastasize even when small, leading to a very poor clinical outcome. Fumarate, a small molecule metabolite that accumulates in fumarate hydratase-deficient cells, plays a key role in cell transformation, making it a bona fide oncometabolite. Fumarate has been shown to inhibit α-ketoglutarate-dependent dioxygenases that are involved in DNA and histone demethylation. However, the link between fumarate accumulation, epigenetic changes, and tumorigenesis is unclear. Here we show that loss of fumarate hydratase and the subsequent accumulation of fumarate in mouse and human cells elicits an epithelial-to-mesenchymal-transition (EMT), a phenotypic switch associated with cancer initiation, invasion, and metastasis. We demonstrate that fumarate inhibits Tet-mediated demethylation of a regulatory region of the antimetastatic miRNA cluster mir-200ba429, leading to the expression of EMT-related transcription factors and enhanced migratory properties. These epigenetic and phenotypic changes are recapitulated by the incubation of fumarate hydratase-proficient cells with cell-permeable fumarate. Loss of fumarate hydratase is associated with suppression of miR-200 and the EMT signature in renal cancer and is associated with poor clinical outcome. These results imply that loss of fumarate hydratase and fumarate accumulation contribute to the aggressive features of fumarate hydratase-deficient tumours.

Indexed as

Epigenesis, GeneticEpithelial-Mesenchymal TransitionAnimalsCell MovementCells, CulturedFumarate HydrataseFumaratesHEK293 CellsHumansKidney NeoplasmsMesodermMiceMicroRNAsTranscription FactorsTranscriptomeFumarate HydrataseFumaratesfumaric acidMicroRNAsMIRN200 microRNA, humanTranscription Factors

Identifiers

PMID27580029
PMCPMC5136292
OpenAlexW2513105811

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.