Evidence map›Paper›PMID 27578865›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Archaeal flagellin combines a bacterial type IV pilin domain with an Ig-like domain.

Tatjana Braun, Matthijn R Vos, Nir Kalisman, Nicholas E Sherman, Reinhard Rachel, Reinhard Wirth, Gunnar F Schröder, Edward H Egelman

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The evolution of archaeal flagellar filaments.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. Functional compartmentalization and metabolic separation in a prokaryotic cell.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Review
  9. Review
  10. A Unique Gene Module inFrontiers in microbiology · 2021
    Article
  11. Article
  12. Article
  13. Review
  14. Architecture and modular assembly ofProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  15. Article
  16. Article
  17. Article
  18. DNA Uptake by Type IV Filaments.Frontiers in molecular biosciences · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Tatjana BraunInstitute of Complex Systems, Forschungszentrum Jülich, 52425 Juelich, Germany;
Matthijn R VosNanoport Europe, FEI Company, 5651 GG Eindhoven, The Netherlands;
Nir KalismanDepartment of Biological Chemistry, The Hebrew University of Jerusalem, Jerusalem 91904, Israel;
Nicholas E ShermanBiomolecular Analysis Facility, University of Virginia, Charlottesville, VA 22903;
Reinhard RachelDepartment of Microbiology, Archaea Center, University of Regensburg, D-93053 Regensburg, Germany;
Reinhard WirthDepartment of Microbiology, Archaea Center, University of Regensburg, D-93053 Regensburg, Germany;
Gunnar F SchröderInstitute of Complex Systems, Forschungszentrum Jülich, 52425 Juelich, Germany; Physics Department, Heinrich Heine University Düsseldorf, 40225 Duesseldorf, Germany; gu.schroeder@fz-juelich.de egelman@virginia.edu.
Edward H EgelmanDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22903 gu.schroeder@fz-juelich.de egelman@virginia.edu.
Forschungszentrum Jülich · DEUniversity of Regensburg · DEUniversity of Virginia · USHebrew University of Jerusalem · IL

Funding

Methods for the Analysis of Helical Macromolecular ComplexesR01EB001567 · NIBIB · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI EGELMAN, EDWARD H. · 2003 to 2014
$3.6M
NIBIB NIH HHS R01 EB001567
6 · The paper itself

Abstract

The bacterial flagellar apparatus, which involves ∼40 different proteins, has been a model system for understanding motility and chemotaxis. The bacterial flagellar filament, largely composed of a single protein, flagellin, has been a model for understanding protein assembly. This system has no homology to the eukaryotic flagellum, in which the filament alone, composed of a microtubule-based axoneme, contains more than 400 different proteins. The archaeal flagellar system is simpler still, in some cases having ∼13 different proteins with a single flagellar filament protein. The archaeal flagellar system has no homology to the bacterial one and must have arisen by convergent evolution. However, it has been understood that the N-terminal domain of the archaeal flagellin is a homolog of the N-terminal domain of bacterial type IV pilin, showing once again how proteins can be repurposed in evolution for different functions. Using cryo-EM, we have been able to generate a nearly complete atomic model for a flagellar-like filament of the archaeon Ignicoccus hospitalis from a reconstruction at ∼4-Å resolution. We can now show that the archaeal flagellar filament contains a β-sandwich, previously seen in the FlaF protein that forms the anchor for the archaeal flagellar filament. In contrast to the bacterial flagellar filament, where the outer globular domains make no contact with each other and are not necessary for either assembly or motility, the archaeal flagellin outer domains make extensive contacts with each other that largely determine the interesting mechanical properties of these filaments, allowing these filaments to flex.

Indexed as

Evolution, MolecularArchaeaArchaeal ProteinsBacteriaBacterial ProteinsChemotaxisCrystallography, X-RayFimbriae, BacterialFimbriae ProteinsFlagellinHalobacterium salinarumImmunoglobulin DomainsProtein DomainsArchaeal ProteinsBacterial ProteinsFimbriae ProteinsFlagellinarchaeacryo-EMflagellar filamentshelical polymers

Identifiers

PMID27578865
PMCPMC5027424
OpenAlexW2515761688

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.