Evidence map›Paper›PMID 27576895›Full record

ArticleAMB Express2016

Degeneration of aflatoxin gene clusters in Aspergillus flavus from Africa and North America.

Bishwo N Adhikari, Ranajit Bandyopadhyay, Peter J Cotty

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 92 citations in OpenAlex.

  1. Distinction BetweenJournal of fungi (Basel, Switzerland) · 2025
    Article
  2. Exploring the Characteristics of AtoxigenicJournal of fungi (Basel, Switzerland) · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Keeping toxigenicFrontiers in microbiology · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Detection of Aflatoxin B1-producingCurrent medical mycology · 2023
    Article
  11. Article
  12. Non-AflatoxigenicACS omega · 2023
    Article
  13. Article
  14. Article
  15. Molecular Characterization ofPolish journal of microbiology · 2022
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Bishwo N AdhikariUSDA-ARS, The University of Arizona, School of Plant Sciences, 303 Forbes Building, P.O. Box 210036, Tucson, AZ, 85721, USA.
Ranajit BandyopadhyayInternational Institute of Tropical Agriculture (IITA), PMB 5320, Oyo Road, Ibadan, Nigeria.
Peter J CottyUSDA-ARS, The University of Arizona, School of Plant Sciences, 303 Forbes Building, P.O. Box 210036, Tucson, AZ, 85721, USA. pjcotty@email.arizona.edu.
University of Arizona · USInternational Institute of Tropical Agriculture · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus flavus is the most common causal agent of aflatoxin contamination of food and feed. However, aflatoxin-producing potential varies widely among A. flavus genotypes with many producing no aflatoxins. Some non-aflatoxigenic genotypes are used as biocontrol agents to prevent contamination. Aflatoxin biosynthesis genes are tightly clustered in a highly conserved order. Gene deletions and presence of single nucleotide polymorphisms (SNPs) in aflatoxin biosynthesis genes are often associated with A. flavus inability to produce aflatoxins. In order to identify mechanisms of non-aflatoxigenicity in non-aflatoxigenic genotypes of value in aflatoxin biocontrol, complete cluster sequences of 35 A. flavus genotypes from Africa and North America were analyzed. Inability of some genotypes to produce aflatoxin resulted from deletion of biosynthesis genes. In other genotypes, non-aflatoxigenicity originated from SNP formation. The process of degeneration differed across the gene cluster; genes involved in early biosynthesis stages were more likely to be deleted while genes involved in later stages displayed high frequencies of SNPs. Comparative analyses of aflatoxin gene clusters provides insight into the diversity of mechanisms of non-aflatoxigenicity in A. flavus genotypes used as biological control agents. The sequences provide resources for both diagnosis of non-aflatoxigenicity and monitoring of biocontrol genotypes during biopesticide manufacture and in the environment.

Indexed as

Aflatoxin gene clusterAspergillus flavusBiocontrolCluster degenerationEvolutionNon-aflatoxigenic

Identifiers

PMID27576895
PMCPMC5005231
OpenAlexW2514921150

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.