Evidence map›Paper›PMID 27573699›Full record

ArticleInternational journal of oncology2016

Protein signatures as potential surrogate biomarkers for stratification and prediction of treatment response in chronic myeloid leukemia patients.

Ayodele A Alaiya, Mahmoud Aljurf, Zakia Shinwari, Fahad Almohareb, Hafiz Malhan, Hazzaa Alzahrani, Tarek Owaidah, Jonathan Fox, Fahad Alsharif, Said Y Mohamed and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of oncology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 43 citations in OpenAlex.

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  15. S100 Proteins in Acute Myeloid Leukemia.Neoplasia (New York, N.Y.) · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Ayodele A AlaiyaProteomics Unit, Stem Cell and Tissue Re-Engineering Program, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Mahmoud AljurfAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Zakia ShinwariProteomics Unit, Stem Cell and Tissue Re-Engineering Program, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Fahad AlmoharebAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Hafiz MalhanAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Hazzaa AlzahraniAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Tarek OwaidahHematopathology Section, Department of Pathology and Laboratory Medicine, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Jonathan FoxWaters U.K. Limited, Atlas Park, Simonsway, Manchester, M22 5PP, UK.
Fahad AlsharifAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Said Y MohamedAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Walid RasheedAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Ghuzayel AldawsariAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Amr HanbaliAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Syed Osman AhmedAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
Naeem ChaudhriAdult Hematology/HSCT Section, Oncology Center, King Faisal Specialist Hospital and Research Centre, (KFSH&RC), Riyadh, 11211 Saudi Arabia.
King Faisal Specialist Hospital & Research Centre · SAWaters (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is unmet need for prediction of treatment response for chronic myeloid leukemia (CML) patients. The present study aims to identify disease-specific/disease-associated protein biomarkers detectable in bone marrow and peripheral blood for objective prediction of individual's best treatment options and prognostic monitoring of CML patients. Bone marrow plasma (BMP) and peripheral blood plasma (PBP) samples from newly-diagnosed chronic-phase CML patients were subjected to expression-proteomics using quantitative two-dimensional gel electrophoresis (2-DE) and label-free liquid chromatography tandem mass spectrometry (LC-MS/MS). Analysis of 2-DE protein fingerprints preceding therapy commencement accurately predicts 13 individuals that achieved major molecular response (MMR) at 6 months from 12 subjects without MMR (No-MMR). Results were independently validated using LC-MS/MS analysis of BMP and PBP from patients that have more than 24 months followed-up. One hundred and sixty-four and 138 proteins with significant differential expression profiles were identified from PBP and BMP, respectively and only 54 proteins overlap between the two datasets. The protein panels also discriminates accurately patients that stay on imatinib treatment from patients ultimately needing alternative treatment. Among the identified proteins are TYRO3, a member of TAM family of receptor tyrosine kinases (RTKs), the S100A8, and MYC and all of which have been implicated in CML. Our findings indicate analyses of a panel of protein signatures is capable of objective prediction of molecular response and therapy choice for CML patients at diagnosis as 'personalized-medicine-model'.

Indexed as

AdolescentAdultAgedAntineoplastic AgentsBiomarkers, TumorBone MarrowCalgranulin AChromatography, LiquidElectrophoresis, Gel, Two-DimensionalFemaleGene Expression Regulation, LeukemicHumansLeukemia, Myelogenous, Chronic, BCR-ABL PositiveMaleMiddle AgedPrognosisAntineoplastic AgentsBiomarkers, TumorCalgranulin AMYC protein, humanProto-Oncogene Proteins c-mycReceptor Protein-Tyrosine KinasesTYRO3 protein, human

Identifiers

PMID27573699
PMCPMC4948960
OpenAlexW2462538267

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.