Evidence map›Paper›PMID 27573290›Full record

ArticleClinical genetics2017

Genetic causes of moderate to severe hearing loss point to modifiers.

Sadaf Naz, Ayesha Imtiaz, Ghulam Mujtaba, Azra Maqsood, Rasheeda Bashir, Ihtisham Bukhari, Muhammad R Khan, Memoona Ramzan, Amara Fatima, Atteeq U Rehman and 6 more

Open access · greenAbstract read
In one paragraph

Article in Clinical genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  6. Compound Heterozygous Mutations ofInternational journal of molecular sciences · 2024
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  16. [Identifications of the novel mutants onLin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Sadaf Naz *School of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Ayesha Imtiaz *School of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Ghulam MujtabaSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Azra MaqsoodSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Rasheeda BashirSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Ihtisham BukhariSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Muhammad R KhanSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Memoona RamzanSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Amara FatimaSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Atteeq U RehmanLaboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Bethesda, USA 20892.
Muddassar IqbalSchool of Biological Sciences, University of the Punjab, Lahore, Pakistan.
Taimur ChaudhryLaboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Bethesda, USA 20892.
Merete LundLaboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Bethesda, USA 20892.
Carmen C BrewerAudiology Unit, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Bethesda, USA 20892.
Robert J MorellLaboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Bethesda, USA 20892.
Thomas B FriedmanLaboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Bethesda, USA 20892.
University of the Punjab · PKNational Institute on Deafness and Other Communication Disorders · USNational Institutes of Health · US

Funding

Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZIADC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS · 2009 to 2025
$48.7M
NIDCD Core for Clinical Research and CareZIDDC000075 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI LEVY, JOSHUA · 2009 to 2025
$33.6M
Clinical Analysis Of Disorders Of Hearing And BalanceZIADC000064 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI HERTZANO, RONNA · 2009 to 2025
$25.2M
Myosin XVA and Other Genes Essential for Stereocilia MorphogenesisZIADC000048 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS · 2009 to 2025
$23.6M
Genomic and Computational Biology Support for NIDCD Intramural ResearchZICDC000086 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI MORELL, ROBERT J · 2015 to 2025
$19.8M
Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZ01DC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS BAER · 1997 to 2008
$7.2M
INTEGRATIVE MECHANISMS OF CORTICAL NEURONSR01DC000086 · NIDCD · YALE UNIVERSITY · PI SHEPHERD, GORDON · 1989 to 2010
$3.6M
SPEECH AND HEARING SCIENCEST32DC000039 · NIDCD · CUNY GRADUATE SCH AND UNIV CTR · PI SCHWARTZ, RICHARD G · 1992 to 2002
$429k
Genetic Basis of Moderate to Severe Hearing Loss in PakistanR01TW007608 · FIC · SCHOOL OF BIOLOGICAL SCIENCES · PI NAZ, SADAF · 2007 to 2011
$270k
FIC NIH HHS R01 TW007608Intramural NIH HHS Z01 DC000039NIDCD NIH HHS R01 DC000086NIDCD NIH HHS T32 DC000039
6 · The paper itself

Abstract

The genetic underpinnings of recessively inherited moderate to severe sensorineural hearing loss are not well understood, despite its higher prevalence in comparison to profound deafness. We recruited 92 consanguineous families segregating stable or progressive, recessively inherited moderate or severe hearing loss. We utilized homozygosity mapping, Sanger sequencing, targeted capture of known deafness genes with massively parallel sequencing and whole exome sequencing to identify the molecular basis of hearing loss in these families. Variants of the known deafness genes were found in 69% of the participating families with the SLC26A4, GJB2, MYO15A, TMC1, TMPRSS3, OTOF, MYO7A and CLDN14 genes together accounting for hearing loss in 54% of the families. We identified 20 reported and 21 novel variants in 21 known deafness genes; 16 of the 20 reported variants, previously associated with stable, profound deafness were associated with moderate to severe or progressive hearing loss in our families. These data point to a prominent role for genetic background, environmental factors or both as modifiers of human hearing loss severity.

Indexed as

Genetic Predisposition to DiseaseHigh-Throughput Nucleotide SequencingAdolescentAdultChildChild, PreschoolExomeFemaleGenes, RecessiveGenetic Association StudiesHearing Loss, SensorineuralHumansMaleMutationPedigreePolymorphism, Single NucleotidedeafnessDFNBetiologyhearing lossmodifiersmutationPakistan

Identifiers

PMID27573290
PMCPMC5365349
OpenAlexW2507389859

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.