Evidence map›Paper›PMID 27573103›Full record

ArticleNature microbiology2016

The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol.

Jing Sun, Jonathan D Todd, J Cameron Thrash, Yanping Qian, Michael C Qian, Ben Temperton, Jiazhen Guo, Emily K Fowler, Joshua T Aldrich, Carrie D Nicora and 8 more

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
17.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 156 citations in OpenAlex.

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  14. Cloning and expression of the dimethylsulfoniopropionate lyase geneCurrent research in microbial sciences · 2025
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 2 countries.

Jing SunDepartment of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA.
Jonathan D ToddSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
J Cameron ThrashDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803, USA.
Yanping QianDepartment of Food Science, Oregon State University, Corvallis, Oregon 97331, USA.
Michael C QianDepartment of Food Science, Oregon State University, Corvallis, Oregon 97331, USA.
Ben TempertonDepartment of Biosciences, University of Exeter, Exeter, EX4 4QD, UK.
Jiazhen GuoQingdao Aquarium, Qingdao, Shandong 266003, China.
Emily K FowlerSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Joshua T AldrichEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
Carrie D NicoraEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
Mary S LiptonEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
Richard D SmithEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
Patrick De LeenheerDepartment of Mathematics, Oregon State University, Corvallis, Oregon 97331, USA.
Samuel H PayneEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
Andrew W B JohnstonSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Cleo L Davie-MartinDepartment of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA.
Kimberly H HalseyDepartment of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA.
Stephen J GiovannoniDepartment of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA.
Oregon State University · USPacific Northwest National Laboratory · USEnvironmental Molecular Sciences Laboratory · USUniversity of East Anglia · GBLouisiana State University · USNorwich Research Park · GBUniversity of Exeter · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine phytoplankton produce ∼10(9) tonnes of dimethylsulfoniopropionate (DMSP) per year(1,2), an estimated 10% of which is catabolized by bacteria through the DMSP cleavage pathway to the climatically active gas dimethyl sulfide(3,4). SAR11 Alphaproteobacteria (order Pelagibacterales), the most abundant chemo-organotrophic bacteria in the oceans, have been shown to assimilate DMSP into biomass, thereby supplying this cell's unusual requirement for reduced sulfur(5,6). Here, we report that Pelagibacter HTCC1062 produces the gas methanethiol, and that a second DMSP catabolic pathway, mediated by a cupin-like DMSP lyase, DddK, simultaneously shunts as much as 59% of DMSP uptake to dimethyl sulfide production. We propose a model in which the allocation of DMSP between these pathways is kinetically controlled to release increasing amounts of dimethyl sulfide as the supply of DMSP exceeds cellular sulfur demands for biosynthesis.

Indexed as

AlphaproteobacteriaAquatic OrganismsGasesMetabolic Networks and PathwaysSulfhydryl CompoundsSulfidesSulfonium Compoundsdimethylpropiothetindimethyl sulfideGasesmethylmercaptanSulfhydryl CompoundsSulfidesSulfonium Compounds

Identifiers

PMID27573103
OpenAlexW2404677456

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.