Evidence map›Paper›PMID 27573017›Full record

ArticleJournal of bacteriology2016

Pyrroloquinoline Quinone Ethanol Dehydrogenase in Methylobacterium extorquens AM1 Extends Lanthanide-Dependent Metabolism to Multicarbon Substrates.

Nathan M Good, Huong N Vu, Carly J Suriano, Gabriel A Subuyuj, Elizabeth Skovran, N Cecilia Martinez-Gomez

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 1 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 1 synthesis or guideline pooled it, 141 citations in OpenAlex.

  1. Pooled it
  2. A frameshift mutation drives divergent biosynthesis of metallophores inbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Functional organization and regulatory logic of theApplied and environmental microbiology · 2026
    Review
  5. A PQQ-dependent oxidoreductase inFrontiers in cellular and infection microbiology · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Identification and characterization of a small-molecule metallophore involved in lanthanide metabolism.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Nathan M GoodDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Huong N VuDepartment of Biological Sciences, San José State University, San José, California, USA.
Carly J SurianoDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Gabriel A SubuyujDepartment of Biological Sciences, San José State University, San José, California, USA.
Elizabeth SkovranDepartment of Biological Sciences, San José State University, San José, California, USA.
N Cecilia Martinez-GomezDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA mart1754@msu.edu.
Michigan State University · USSan Jose State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lanthanides are utilized by microbial methanol dehydrogenases, and it has been proposed that lanthanides may be important for other type I alcohol dehydrogenases. A triple mutant strain (mxaF xoxF1 xoxF2; named MDH-3), deficient in the three known methanol dehydrogenases of the model methylotroph Methylobacterium extorquens AM1, is able to grow poorly with methanol if exogenous lanthanides are added to the growth medium. When the gene encoding a putative quinoprotein ethanol dehydrogenase, exaF, was mutated in the MDH-3 background, the quadruple mutant strain could no longer grow on methanol in minimal medium with added lanthanum (La IMPORTANCE: ExaF is the most efficient PQQ-dependent ethanol dehydrogenase reported to date and, to our knowledge, the first non-XoxF-type alcohol oxidation system reported to use lanthanides as a cofactor, expanding the importance of lanthanides in biochemistry and bacterial metabolism beyond methanol dehydrogenases to multicarbon metabolism. These results support an earlier proposal that an aspartate residue near the catalytic aspartate residue may be an indicator of rare-earth element utilization by type I alcohol dehydrogenases.

Indexed as

AcetaldehydeAlcohol OxidoreductasesBacterial ProteinsEthanolFormaldehydeLanthanoid Series ElementsLanthanumMethanolMethylobacterium extorquensMutationOxidation-ReductionPQQ CofactorAcetaldehydealcohol dehydrogenase (acceptor)Alcohol OxidoreductasesBacterial ProteinsEthanolFormaldehydeLanthanoid Series ElementsLanthanumMethanolPQQ Cofactor

Identifiers

PMID27573017
PMCPMC5075040
OpenAlexW2515574181

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.