Evidence map›Paper›PMID 27572178›Full record

ArticleScientific reports2016

Specialized Microbiome of a Halophyte and its Role in Helping Non-Host Plants to Withstand Salinity.

Zhilin Yuan, Irina S Druzhinina, Jessy Labbé, Regina Redman, Yuan Qin, Russell Rodriguez, Chulong Zhang, Gerald A Tuskan, Fucheng Lin

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed.

  1. Review
  2. Article
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  11. Enhancing Drought Tolerance inPlants (Basel, Switzerland) · 2025
    Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Applied microbiology of the phyllosphere.Applied microbiology and biotechnology · 2024
    Review
  19. Article
  20. Review

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhilin YuanInstitute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, P. R. China.
Irina S DruzhininaResearch Area Biochemical Technology, Institute of Chemical Engineering, TU Wien, Vienna, Austria.
Jessy LabbéBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, USA.
Regina RedmanAdaptive Symbiotic Technologies, Seattle, USA.
Yuan QinInstitute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, P. R. China.
Russell RodriguezAdaptive Symbiotic Technologies, Seattle, USA.
Chulong ZhangState Key Laboratory for Rice Biology, Institute of Biotechnology, Zhejiang University, P. R. China.
Gerald A TuskanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, USA.
Fucheng LinState Key Laboratory for Rice Biology, Institute of Biotechnology, Zhejiang University, P. R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Root microbiota is a crucial determinant of plant productivity and stress tolerance. Here, we hypothesize that the superior halo-tolerance of seepweed Suaeda salsa is tightly linked to a specialized belowground microbiome. To test this hypothesis, we performed a phylogenetic trait-based framework analysis based on bacterial 16S rRNA gene and fungal nuclear rRNA internal transcribed spacer profiling. Data showed that the dominant α-proteobacteria and γ-proteobacteria communities in bulk soil and root endosphere tend to be phylogenetically clustered and at the same time exhibit phylogenetic over-dispersion in rhizosphere. Likewise, the dominant fungal genera occurred at high phylogenetic redundancy. Interestingly, we found the genomes of rhizospheric and endophytic bacteria associated with S. salsa to be enriched in genes contributing to salt stress acclimatization, nutrient solubilization and competitive root colonization. A wide diversity of rhizobacteria with similarity to known halotolerant taxa further supported this interpretation. These findings suggest that an ecological patterned root-microbial interaction strategy has been adopted in S. salsa system to confront soil salinity. We also demonstrated that the potential core microbiome members improve non-host plants growth and salt tolerance. This work provides a platform to improve plant fitness with halophytes-microbial associates and novel insights into the functions of plant microbiome under salinity.

Indexed as

Soil MicrobiologyBiodiversityMicrobiotaPhylogenyPlant RootsRhizosphereRNA, Ribosomal, 16SSalinitySalt-Tolerant PlantsRNA, Ribosomal, 16S

Identifiers

PMID27572178
PMCPMC5004162

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.